RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SNX10Q9Y5X0 201 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TNRC6AQ8NDV7 1962 aaKnown RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SHANK1Q9Y566 2161 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SPTBP11277 2137 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ESPL1Q14674 2120 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SEC16AO15027 2179 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 hCG_2014768A0A024R1R8 64 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 GOLGA6L6A8MZA4 724 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 E5RJQ4 531 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 PRAMEF26H0Y7S4 382 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 K7ENP7 123 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 CAPN9O14815 690 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 MCF2LO15068 1137 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SCAMP1O15126 338 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SLC7A4O43246 635 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 DAPK3O43293 454 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SLC28A2O43868 658 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 MFAP3LO75121 409 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 GCATO75600 419 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 CRTAMO95727 393 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 TRUB2O95900 331 aaKnown RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 PAEPP09466 180 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SRCP12931 536 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 TRIM21P19474 475 aaKnown RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 WT1P19544 449 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 RRM1P23921 792 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 MC4RP32245 332 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 MAN2A2P49641 1150 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SLC8A3P57103 927 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ERVPABLB-1P60509 514 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 HGFACQ04756 655 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 OVGP1Q12889 678 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 EIF2B5Q13144 721 aaKnown RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 PNOCQ13519 176 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 STAT4Q14765 748 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 CDKN3Q16667 212 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 EDRF1Q3B7T1 1238 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ARL13BQ3SXY8 428 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SETMARQ53H47 684 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ALFQ53S48 1182 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 C3orf38Q5JPI3 329 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 INO80CQ6PI98 192 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 KRBA2Q6ZNG9 492 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 RRAGAQ7L523 313 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 HORMAD1Q86X24 394 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 CHSY1Q86X52 802 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 GPR135Q8IZ08 494 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF683Q8IZ20 524 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 WDTC1Q8N5D0 677 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 CCDC150Q8NCX0 1101 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 OR2A12Q8NGT7 310 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 IFI44Q8TCB0 444 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 KCNE4Q8WWG9 221 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ASB15Q8WXK1 588 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 OR8D1Q8WZ84 308 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ERCC4Q92889 916 aaPredicted RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SKA1Q96BD8 255 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 MED8Q96G25 268 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 SERPINB11Q96P15 392 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 DEPDC7Q96QD5 511 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 CALN1Q9BXU9 219 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 BRINP2Q9C0B6 783 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 NLGN3Q9NZ94 848 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 HESX1Q9UBX0 185 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 PFDN2Q9UHV9 154 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 KIAA1257Q9ULG3 409 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 PRKAB1Q9Y478 270 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ACTL7AQ9Y615 435 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 TACC2O95359 2948 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 DCHS2Q6V1P9 2916 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 MDC1Q14676 2089 aaKnown RBP4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
CKS1B-207ENST00000477676 ABCA12Q86UK0 2595 aa4.65□□□□□ -1.66
CKS1B-207ENST00000477676 A0A0D9SEW6 157 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SPTY2D1-AS1A0A0U1RR47 76 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CPED1A4D0V7 1026 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 EME2A4GXA9 379 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CETN3O15182 167 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 GRAP2O75791 330 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ZMPSTE24O75844 475 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 IPO13O94829 963 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ADCY5O95622 1261 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CD160O95971 181 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 MYL1P05976 194 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 GP1BAP07359 652 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 EPB41P11171 864 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 HNRNPA2B1P22626 353 aaKnown RBP4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SDHAP31040 664 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 CHRNA3P32297 505 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ADRA1BP35368 520 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 NUDT1P36639 197 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SYKP43405 635 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 FMO5P49326 533 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 APBA1Q02410 837 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ROM1Q03395 351 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 SLC12A1Q13621 1099 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 TGIF1Q15583 401 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 ARHGAP44Q17R89 818 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 DEFB133Q30KQ1 61 aa4.65□□□□□ -1.67
CKS1B-207ENST00000477676 C5orf22Q49AR2 442 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms