RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NDUFS3O75489 264 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 S1PR4O95977 384 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 F7P08709 466 aaPredicted RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 HOXC4P09017 264 aaPredicted RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 THEGLP0DJG4 465 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 THOP1P52888 689 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 MPP1Q00013 466 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 TCF15Q12870 199 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 NFATC4Q14934 902 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 KLHL38Q2WGJ6 581 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 KHDC1Q4VXA5 237 aaKnown RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 ZNF648Q5T619 568 aaPredicted RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 RNF187Q5TA31 235 aaPredicted RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 KIAA0408Q6ZU52 694 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 SLC26A11Q86WA9 606 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 RBFAQ8N0V3 343 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 MFSD2AQ8NA29 543 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 CCDC97Q96F63 343 aaPredicted RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 KLHDC7BQ96G42 594 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 BOCQ9BWV1 1114 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 ZCCHC2Q9C0B9 1178 aaKnown RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 FBXO6Q9NRD1 293 aaPredicted RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 INTS10Q9NVR2 710 aaKnown RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 VPS9D1Q9Y2B5 631 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 PSAT1Q9Y617 370 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 PCDH15Q96QU1 1955 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 EXOC1LA0A1B0GW35 172 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 UBA6A0AVT1 1052 aaPredicted RBP16.01■□□□□ 0.15
VHL-203ENST00000477538 CFAP99D6REC4 459 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 ASMTLO95671 621 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 WNT1P04628 370 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 RALBP11234 206 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 GNSP15586 552 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 ZNF7P17097 686 aaPredicted RBP16.01■□□□□ 0.15
VHL-203ENST00000477538 MSH3P20585 1137 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 HTR1BP28222 390 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 B4GALNT1Q00973 533 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 PDE1CQ14123 709 aaPredicted RBP16.01■□□□□ 0.15
VHL-203ENST00000477538 LPAL2Q16609 132 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 ZNF789Q5FWF6 425 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 FBXO38Q6PIJ6 1188 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 DOK6Q6PKX4 331 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 LAYNQ6UX15 382 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 PACS1Q6VY07 963 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 STRA8Q7Z7C7 330 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 GALNT7Q86SF2 657 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 IQCHQ86VS3 1027 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 LRRC6Q86X45 466 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 HEXDCQ8WVB3 486 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 LPGAT1Q92604 370 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 PIGKQ92643 395 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 DCUN1D1Q96GG9 259 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 WDR92Q96MX6 357 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 CPNE1Q99829 537 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 CCDC77Q9BR77 488 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 OR2AG1Q9H205 316 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 TRIM39Q9HCM9 518 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 GPR27Q9NS67 375 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 VPS18Q9P253 973 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 TXNDC16Q9P2K2 825 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 SUSD2Q9UGT4 822 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 PILRBQ9UKJ0 227 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 RAB23Q9ULC3 237 aa16.01■□□□□ 0.15
VHL-203ENST00000477538 CABIN1Q9Y6J0 2220 aa16■□□□□ 0.15
VHL-203ENST00000477538 A0A1B0GTW7 788 aa16■□□□□ 0.15
VHL-203ENST00000477538 PRR5-ARHGAP8B1AHC4 643 aa16■□□□□ 0.15
VHL-203ENST00000477538 POC1B-GALNT4F8VUJ3 575 aa16■□□□□ 0.15
VHL-203ENST00000477538 VEGFDO43915 354 aa16■□□□□ 0.15
VHL-203ENST00000477538 OR1I1O60431 355 aa16■□□□□ 0.15
VHL-203ENST00000477538 HAUS5O94927 633 aa16■□□□□ 0.15
VHL-203ENST00000477538 SHBGP04278 402 aa16■□□□□ 0.15
VHL-203ENST00000477538 NUDT17P0C025 328 aa16■□□□□ 0.15
VHL-203ENST00000477538 ATP1B2P14415 290 aaPredicted RBP16■□□□□ 0.15
VHL-203ENST00000477538 KELP23276 732 aa16■□□□□ 0.15
VHL-203ENST00000477538 DPP6P42658 865 aa16■□□□□ 0.15
VHL-203ENST00000477538 NSG1P42857 185 aa16■□□□□ 0.15
VHL-203ENST00000477538 LEPRP48357 1165 aaKnown RBP16■□□□□ 0.15
VHL-203ENST00000477538 AFF3P51826 1226 aaKnown RBP16■□□□□ 0.15
VHL-203ENST00000477538 OVGP1Q12889 678 aa16■□□□□ 0.15
VHL-203ENST00000477538 TMEM115Q12893 351 aaPredicted RBP16■□□□□ 0.15
VHL-203ENST00000477538 GTF2H3Q13889 308 aa16■□□□□ 0.15
VHL-203ENST00000477538 PTK2BQ14289 1009 aa16■□□□□ 0.15
VHL-203ENST00000477538 TPRG1LQ5T0D9 272 aa16■□□□□ 0.15
VHL-203ENST00000477538 MACC1Q6ZN28 852 aa16■□□□□ 0.15
VHL-203ENST00000477538 ADGRG6Q86SQ4 1221 aa16■□□□□ 0.15
VHL-203ENST00000477538 DCP2Q8IU60 420 aaKnown RBP16■□□□□ 0.15
VHL-203ENST00000477538 SYT12Q8IV01 421 aa16■□□□□ 0.15
VHL-203ENST00000477538 SLC22A18ASQ8N1D0 253 aa16■□□□□ 0.15
VHL-203ENST00000477538 MRRFQ96E11 262 aaKnown RBP16■□□□□ 0.15
VHL-203ENST00000477538 PAFAH2Q99487 392 aa16■□□□□ 0.15
VHL-203ENST00000477538 CLPBQ9H078 707 aa16■□□□□ 0.15
VHL-203ENST00000477538 TMEM74BQ9NUR3 256 aa16■□□□□ 0.15
VHL-203ENST00000477538 ATXN10Q9UBB4 475 aa16■□□□□ 0.15
VHL-203ENST00000477538 CRYL1Q9Y2S2 319 aa16■□□□□ 0.15
VHL-203ENST00000477538 TMEM98Q9Y2Y6 226 aa16■□□□□ 0.15
VHL-203ENST00000477538 TMEM202A6NGA9 273 aa15.99■□□□□ 0.15
VHL-203ENST00000477538 PRMT5O14744 637 aaPredicted RBP15.99■□□□□ 0.15
VHL-203ENST00000477538 VILLO15195 856 aa15.99■□□□□ 0.15
VHL-203ENST00000477538 MAGEC1O60732 1142 aa15.99■□□□□ 0.15
VHL-203ENST00000477538 CDK14O94921 469 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms