RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLC29A3Q9BZD2 475 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 OR2AG1Q9H205 316 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 FAM83DQ9H4H8 585 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 RMI1Q9H9A7 625 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 PDE7BQ9NP56 450 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 SLAMF7Q9NQ25 335 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 FANCLQ9NW38 375 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 SIDT1Q9NXL6 827 aaKnown RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 VPS18Q9P253 973 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 ATXN10Q9UBB4 475 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 DNPEPQ9ULA0 475 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 PADI1Q9ULC6 663 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 G3BP2Q9UN86 482 aaKnown RBP6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 SCINQ9Y6U3 715 aa6.59□□□□□ -1.35
RTFDC1-206ENST00000477485 CCDC88CQ9P219 2028 aa6.59□□□□□ -1.36
RTFDC1-206ENST00000477485 CREBBPQ92793 2442 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 UNC79Q9P2D8 2635 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 TMEM191CA6NGB0 347 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 A6NL46 340 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 LGALS16A8MUM7 142 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 MFSD11O43934 449 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 NUAK1O60285 661 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 TIAF1O95411 115 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PEX11BO96011 259 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 C9P02748 559 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 RNF224P0DH78 156 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF8P17098 575 aaPredicted RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 HCAR3P49019 387 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF165P49910 485 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 DRG2P55039 364 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 RPS15P62841 145 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PDE1BQ01064 536 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 MRPL49Q13405 166 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 TUBB3Q13509 450 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 SEMA5AQ13591 1074 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 GALNT3Q14435 633 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 IL11RAQ14626 422 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 KCNAB1Q14722 419 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PLCL1Q15111 1095 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ASIC2Q16515 512 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 EIF2S3LQ2VIR3 472 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PRR30Q53SZ7 412 aaPredicted RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ANKRD20A8PQ5CZ79 823 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ZFYVE27Q5T4F4 411 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 CDKAL1Q5VV42 579 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PLEKHA7Q6IQ23 1121 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 FAM199XQ6PEV8 388 aaPredicted RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 TMEM26Q6ZUK4 368 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 CYP4V2Q6ZWL3 525 aaPredicted RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 POLNQ7Z5Q5 900 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PSTKQ8IV42 348 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 CBARPQ8N350 705 aaPredicted RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 GDAP1Q8TB36 358 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ENOX1Q8TC92 643 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 LRRN4Q8WUT4 740 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 RSC1A1Q92681 617 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 MR1Q95460 341 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ZDHHC12Q96GR4 267 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 RUFY1Q96T51 708 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 MLPHQ9BV36 600 aaPredicted RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 TDRD1Q9BXT4 1180 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 CARD9Q9H257 536 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF768Q9H5H4 540 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PCDH9Q9HC56 1237 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 MRPL47Q9HD33 250 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 LHX9Q9NQ69 397 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 RBM22Q9NW64 420 aaKnown RBP eCLIP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 OGFRQ9NZT2 677 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 SCHIP1Q9P0W5 487 aaPredicted RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 RARRES3Q9UL19 164 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 SLC30A1Q9Y6M5 507 aa6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 SPENQ96T58 3664 aaKnown RBP6.58□□□□□ -1.36
RTFDC1-206ENST00000477485 PIKFYVEQ9Y2I7 2098 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 CENPEQ02224 2701 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 NOTCH2Q04721 2471 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 LRRC53A6NM62 1247 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 OR52A4PA6NMU1 304 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 C21orf140B9A014 251 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 KMOO15229 486 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 MTX2O75431 263 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 FTLP02792 175 aaPredicted RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 HLA-DQB2P05538 268 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 PIRTP0C851 137 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 EBLN1P0CF75 366 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 RARAP10276 462 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 ATP1A3P13637 1013 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 TCF4P15884 667 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 ZNF7P17097 686 aaPredicted RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 VCLP18206 1134 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 IDSP22304 550 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 IL4RP24394 825 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 IL1R2P27930 398 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 PTPN4P29074 926 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 CD86P42081 329 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 HALP42357 657 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 CAPZBP47756 277 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 SPINT3P49223 89 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 PPP1CAP62136 330 aa6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 UBE2IP63279 158 aaKnown RBP6.57□□□□□ -1.36
RTFDC1-206ENST00000477485 MMRN1Q13201 1228 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms