RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 CCDC42Q96M95 316 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 PI4K2AQ9BTU6 479 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 QTRT1Q9BXR0 403 aaKnown RBP5.42□□□□□ -1.54
SSR3-206ENST00000476217 IFIH1Q9BYX4 1025 aaKnown RBP5.42□□□□□ -1.54
SSR3-206ENST00000476217 TRIM2Q9C040 744 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 WDR12Q9GZL7 423 aaKnown RBP5.42□□□□□ -1.54
SSR3-206ENST00000476217 ASB7Q9H672 318 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 PLEKHA5Q9HAU0 1116 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 FBXL5Q9UKA1 691 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 ITGA11Q9UKX5 1188 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 PADI3Q9ULW8 664 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 MYO6Q9UM54 1294 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 COQ4Q9Y3A0 265 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 PCDHB2Q9Y5E7 798 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 HEMK1Q9Y5R4 338 aaPredicted RBP5.42□□□□□ -1.54
SSR3-206ENST00000476217 ANK1P16157 1881 aa5.42□□□□□ -1.54
SSR3-206ENST00000476217 CCDC187A0A096LP49 1063 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 C3orf70A6NLC5 250 aaPredicted RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 FCHO1O14526 889 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 INPPL1O15357 1258 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 ZSCAN12O43309 604 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 ENO1P06733 434 aaKnown RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 CCDC175P0C221 793 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 PNMA6AP0CW24 399 aaPredicted RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 P4HA1P13674 534 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 TBXAS1P24557 533 aaPredicted RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 HNRNPH3P31942 346 aaKnown RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 PTGER1P34995 402 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 MLH1P40692 756 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 MYL6P60660 151 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 MTF1Q14872 753 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 SPA17Q15506 151 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 MEA1Q16626 185 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 SGSM1Q2NKQ1 1148 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 TRIM60Q495X7 471 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 SPOPLQ6IQ16 392 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 WDR93Q6P2C0 686 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 TMEM88Q6PEY1 159 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 WDR59Q6PJI9 974 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 SCARA5Q6ZMJ2 495 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 KIAA1328Q86T90 577 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 TRABD2AQ86V40 505 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 VPS36Q86VN1 386 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 LAS2Q8IYD9 372 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 CCDC170Q8IYT3 715 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 LMO3Q8TAP4 145 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 KIAA1524Q8TCG1 905 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 PRR11Q96HE9 360 aaPredicted RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 CHP1Q99653 195 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 DESI2Q9BSY9 194 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.41□□□□□ -1.54
SSR3-206ENST00000476217 SLC29A3Q9BZD2 475 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 HIPK3Q9H422 1215 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 C11orf49Q9H6J7 331 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 NHEJ1Q9H9Q4 299 aaPredicted RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 SEPT11Q9NVA2 429 aaKnown RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 TRMT1Q9NXH9 659 aaKnown RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 DPP3Q9NY33 737 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 AIPL1Q9NZN9 384 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 VPS4AQ9UN37 437 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 DERAQ9Y315 318 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 C2CD2Q9Y426 696 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 BZW2Q9Y6E2 419 aaKnown RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 SQORQ9Y6N5 450 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 CITO14578 2027 aa5.41□□□□□ -1.54
SSR3-206ENST00000476217 PDCD11Q14690 1871 aaKnown RBP5.41□□□□□ -1.54
SSR3-206ENST00000476217 A0A087WV62 115 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 KCNU1A8MYU2 1149 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 PCDH17O14917 1159 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 PIP5K1BO14986 540 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 ASS1P00966 412 aaKnown RBP5.4□□□□□ -1.54
SSR3-206ENST00000476217 CD4P01730 458 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 ITGA2BP08514 1039 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 PLEKP08567 350 aaPredicted RBP5.4□□□□□ -1.54
SSR3-206ENST00000476217 KCNE1P15382 129 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 CD58P19256 250 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 NDUFS1P28331 727 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 CCL23P55773 120 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 YWHAEP62258 255 aaKnown RBP5.4□□□□□ -1.54
SSR3-206ENST00000476217 TNNC1P63316 161 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 KRT83P78385 493 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 RBP5P82980 135 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 ID2Q02363 134 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 GCNT1Q02742 428 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 TLE2Q04725 743 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 CUL2Q13617 745 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 SPARCL1Q14515 664 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 KPNB1Q14974 876 aaKnown RBP5.4□□□□□ -1.54
SSR3-206ENST00000476217 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 ELF2Q15723 593 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 ZNF667Q5HYK9 610 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 DNTTIP2Q5QJE6 756 aaKnown RBP5.4□□□□□ -1.54
SSR3-206ENST00000476217 PXDC1Q5TGL8 231 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 RAD9BQ6WBX8 426 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 ANKRD33Q7Z3H0 272 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 C1QL2Q7Z5L3 287 aa5.4□□□□□ -1.54
SSR3-206ENST00000476217 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
SSR3-206ENST00000476217 CCAR2Q8N163 923 aaKnown RBP5.4□□□□□ -1.54
SSR3-206ENST00000476217 IPO4Q8TEX9 1081 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms