RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-227ENST00000475832 TRMT6Q9UJA5 497 aaKnown RBP12.14□□□□□ -0.47
MRPL55-227ENST00000475832 HCN2Q9UL51 889 aa12.14□□□□□ -0.47
MRPL55-227ENST00000475832 RUVBL2Q9Y230 463 aaKnown RBP12.14□□□□□ -0.47
MRPL55-227ENST00000475832 COL4A3Q01955 1670 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 F5P12259 2224 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 TRBV5-4A0A0C4DH59 114 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 A0A0U1RQS6 177 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 KANSL1LA0AUZ9 987 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 GMNCA6NCL1 334 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 QSOX1O00391 747 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 AREL1O15033 823 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 MID1O15344 667 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 BIRC5O15392 142 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 PI15O43692 258 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 ATG13O75143 517 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 KLHL2O95198 593 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 VIMP08670 466 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 F7P08709 466 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RBP1P09455 135 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 LTA4HP09960 611 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 OR56A5P0C7T3 313 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 CD9P21926 228 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 FDXRP22570 491 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 AKT1P31749 480 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 ETV3P41162 512 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RPS14P62263 151 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 CNTN1Q12860 1018 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RALGDSQ12967 914 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 TTLL9Q3SXZ7 439 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 LDLRAP1Q5SW96 308 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RBM20Q5T481 1227 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 Q6ZVL8 140 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 KBTBD6Q86V97 674 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 NUDCD3Q8IVD9 361 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 PIANPQ8IYJ0 282 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 NKAPQ8N5F7 415 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 ARMC2Q8NEN0 867 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 FLCNQ8NFG4 579 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RPLP0P6Q8NHW5 317 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RAB3IL1Q8TBN0 382 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 RDH11Q8TC12 318 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 KCNJ9Q92806 393 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 COL26A1Q96A83 441 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 AP2M1Q96CW1 435 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 NUS1Q96E22 293 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 CHMP6Q96FZ7 201 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 PANX3Q96QZ0 392 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 C1QTNF7Q9BXJ2 289 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 OSBPL6Q9BZF3 934 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 ZCCHC2Q9C0B9 1178 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 EPN3Q9H201 632 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 NMRAL1Q9HBL8 299 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 POLMQ9NP87 494 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 SMOXQ9NWM0 555 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 DLGAP2Q9P1A6 1054 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 SLC17A7Q9P2U7 560 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
MRPL55-227ENST00000475832 ZNF292O60281 2723 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 CHD6Q8TD26 2715 aa12.13□□□□□ -0.47
MRPL55-227ENST00000475832 AGAP14A8MT82 685 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 PCDH8O95206 1070 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
MRPL55-227ENST00000475832 SLC35E2BP0CK96 405 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 PRSS56P0CW18 603 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 C6P13671 934 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 UGT1A6P19224 532 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 TAC1P20366 129 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 MSH3P20585 1137 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 UGT1A1P22309 533 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 UGT1A4P22310 534 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 UGT1A3P35503 534 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 UGT1A5P35504 534 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 SERPINB4P48594 390 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 CDKN1CP49918 316 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-227ENST00000475832 PRKAA2P54646 552 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 WDR4P57081 412 aaKnown RBP12.12□□□□□ -0.47
MRPL55-227ENST00000475832 TERF2Q15554 542 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 CRY1Q16526 586 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 PDK4Q16654 411 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 TECPR1Q7Z6L1 1165 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 CPLX4Q7Z7G2 160 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 CLEC14AQ86T13 490 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 NLRP8Q86W28 1048 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 TMPRSS6Q8IU80 811 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 PHYKPLQ8IUZ5 450 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 PJA1Q8NG27 643 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 EZH1Q92800 747 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-227ENST00000475832 DTD2Q96FN9 168 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 SIPA1Q96FS4 1042 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 COQ10AQ96MF6 247 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 NELL2Q99435 816 aa12.12□□□□□ -0.47
MRPL55-227ENST00000475832 RIOK2Q9BVS4 552 aaKnown RBP12.12□□□□□ -0.47
MRPL55-227ENST00000475832 FBXL12Q9NXK8 326 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms