RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TBCBQ99426 244 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 UTP23Q9BRU9 249 aaKnown RBP4.08□□□□□ -1.76
USP16-205ENST00000474835 NAT9Q9BTE0 207 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 NFKBIZQ9BYH8 718 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 C11orf49Q9H6J7 331 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PPP1R3EQ9H7J1 279 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 POLR1BQ9H9Y6 1135 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 SLC25A19Q9HC21 320 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 TIGARQ9NQ88 270 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 VNN3Q9NY84 501 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 PI4KBQ9UBF8 816 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 KLF15Q9UIH9 416 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 MICAL3Q7RTP6 2002 aa4.08□□□□□ -1.76
USP16-205ENST00000474835 IQCMA0A1B0GVH7 501 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 WDR91A4D1P6 747 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MFSD2BA6NFX1 497 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 GFYI3L273 518 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TRIM13O60858 407 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CYP7B1O75881 506 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PEX11BO96011 259 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MIPP30301 263 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 IRS1P35568 1242 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ACTR2P61160 394 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TOP3AQ13472 1001 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 BMPR2Q13873 1038 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 DAG1Q14118 895 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SLC25A30Q5SVS4 291 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 DACT2Q5SW24 774 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 C6orf163Q5TEZ5 329 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 NPNTQ6UXI9 565 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SLC26A9Q7LBE3 791 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PDIK1LQ8N165 341 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CLIP4Q8N3C7 705 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 C2CD4AQ8NCU7 369 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 ZNF548Q8NEK5 533 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 OR4C15Q8NGM1 316 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PPP1R13LQ8WUF5 828 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MARC2Q969Z3 335 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CDCA5Q96FF9 252 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CEP170P1Q96L14 293 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ZDHHC15Q96MV8 337 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 NPAS2Q99743 824 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 C17orf62Q9BQA9 187 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 LBHD1Q9BQE6 289 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 APOL6Q9BWW8 343 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 WDR11Q9BZH6 1224 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TWSG1Q9GZX9 223 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MIXL1Q9H2W2 232 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 RNPEPQ9H4A4 650 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 BARX1Q9HBU1 254 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 ARNT2Q9HBZ2 717 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SNTG2Q9NY99 539 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 BACE2Q9Y5Z0 518 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 RANBP2P49792 3224 aaKnown RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 MPTX1A8MV57 137 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ZNF99A8MXY4 864 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 H3BMM5 538 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PSMD11O00231 422 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 EI24O14681 340 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MSCO60682 206 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TULP3O75386 442 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TRPA1O75762 1119 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 BAG2O95816 211 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 HLA-DRAP01903 254 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 FTH1P02794 183 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TGFB3P10600 412 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 KITP10721 976 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CKMT1AP12532 417 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 KCNA2P16389 499 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 HOXB6P17509 224 aaKnown RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 POU3F3P20264 500 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 FSHRP23945 695 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 UBE3AQ05086 875 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 NRF1Q16656 503 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TMEM201Q5SNT2 666 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 LRIF1Q5T3J3 769 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MROH9Q5TGP6 573 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MACC1Q6ZN28 852 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 PODNQ7Z5L7 613 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 ZNF605Q86T29 641 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 TMEM151BQ8IW70 566 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 GHDCQ8N2G8 530 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 GPD1LQ8N335 351 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SFRP1Q8N474 314 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 C11orf24Q96F05 449 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 NRBF2Q96F24 287 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 NT5C1BQ96P26 610 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 GPR101Q96P66 508 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 APBA2Q99767 749 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MARVELD1Q9BSK0 173 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MED18Q9BUE0 208 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 AMNQ9BXJ7 453 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 CDCA4Q9BXL8 241 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 BMP2KQ9NSY1 1161 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.07□□□□□ -1.76
USP16-205ENST00000474835 MAN2B2Q9Y2E5 1009 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 SF3B6Q9Y3B4 125 aaKnown RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 ANGPTL3Q9Y5C1 460 aa4.07□□□□□ -1.76
USP16-205ENST00000474835 MAFBQ9Y5Q3 323 aaPredicted RBP4.07□□□□□ -1.76
USP16-205ENST00000474835 AP1M2Q9Y6Q5 423 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms