RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 EDEM1Q92611 657 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 EXT2Q93063 718 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZNF566Q969W8 418 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 MOCOSQ96EN8 888 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 FCRL2Q96LA5 508 aaPredicted RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 PPP3R2Q96LZ3 170 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CEP295NLQ96MC4 621 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZNF382Q96SR6 550 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SLC30A3Q99726 388 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SLC39A3Q9BRY0 314 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZYG11BQ9C0D3 744 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 POLR1EQ9GZS1 481 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 ELP3Q9H9T3 547 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 MOV10Q9HCE1 1003 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 HEBP1Q9NRV9 189 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 OLA1Q9NTK5 396 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.07□□□□□ -1.44
HERC4-209ENST00000473533 KLK14Q9P0G3 267 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 EIF3LQ9Y262 564 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 GIT1Q9Y2X7 761 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PCDHGB1Q9Y5G3 927 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PCDHGA11Q9Y5H2 935 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 MOXD2PA6NHM9 499 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 HHLA1C9JL84 531 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 E9PAM4 449 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 H0Y626 953 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 UBFD1O14562 309 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 DYNC1LI2O43237 492 aaPredicted RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 NDUFS3O75489 264 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 TRIM16O95361 564 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ALPLP05186 524 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CD1EP15812 388 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 HDCP19113 662 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 IL12AP29459 219 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 RYKP34925 604 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CXCR4P61073 352 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 TYSND1Q2T9J0 566 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 XKR7Q5GH72 579 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 C6orf141Q5SZD1 244 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PRAMEF18Q5VWM3 479 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 NANOGP8Q6NSW7 305 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 MSANTD2Q6P1R3 559 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ADCK1Q86TW2 530 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 RIMKLAQ8IXN7 391 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 OFCC1Q8IZS5 231 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 OR4L1Q8NH43 312 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 DNAJB14Q8TBM8 379 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 RORBQ92753 470 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 MUL1Q969V5 352 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 MYLPFQ96A32 169 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 TAMM41Q96BW9 452 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 BTN2A3PQ96KV6 586 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PHF12Q96QT6 1004 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 NODALQ96S42 347 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ATOH8Q96SQ7 321 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 NANOGQ9H9S0 305 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SPC25Q9HBM1 224 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 FBRSL1Q9HCM7 1045 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 NT5MQ9NPB1 228 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 TMEM248Q9NWD8 314 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 NUDT4Q9NZJ9 180 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ARIH1Q9Y4X5 557 aaPredicted RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 SHROOM3Q8TF72 1996 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZNF99A8MXY4 864 aaPredicted RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 BOLA2-SMG1P6H3BVE0 249 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SYNCRIPO60506 623 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 SNAP29O95721 258 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 F2P00734 622 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SLC4A1P02730 911 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CYP11A1P05108 521 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 UGT2B4P06133 528 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 GGT1P19440 569 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 OXTRP30559 389 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 CD86P42081 329 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 HALP42357 657 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 RXRGP48443 463 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PCYT1AP49585 367 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 EIF2B2P49770 351 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZNF235Q14590 738 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 OXA1LQ15070 435 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PITRM1Q5JRX3 1037 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 UBXN11Q5T124 520 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 XKR5Q6UX68 686 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 RNF165Q6ZSG1 346 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZC3H7AQ8IWR0 971 aaKnown RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 STK40Q8N2I9 435 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SLC15A4Q8N697 577 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 TEX26Q8N6G2 289 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZMIZ2Q8NF64 920 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PJA1Q8NG27 643 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 OR13J1Q8NGT2 312 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 GRIN3AQ8TCU5 1115 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 SNX19Q92543 992 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 FCGR1BQ92637 280 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 TMBIM1Q969X1 311 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 C3orf30Q96M34 536 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 ZNF641Q96N77 438 aaPredicted RBP6.07□□□□□ -1.44
HERC4-209ENST00000473533 MUS81Q96NY9 551 aa6.07□□□□□ -1.44
HERC4-209ENST00000473533 PGLYRP2Q96PD5 576 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms