RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 EIF3CLB5ME19 914 aaKnown RBP9.2□□□□□ -0.94
VCL-204ENST00000472585 HNRNPRO43390 633 aaKnown RBP9.2□□□□□ -0.94
VCL-204ENST00000472585 SNX2O60749 519 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 SORBS2O94875 1100 aaKnown RBP9.2□□□□□ -0.94
VCL-204ENST00000472585 ASMTLO95671 621 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ANKRD34CP0C6C1 535 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 CCNYL3P0C7X3 344 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ACP5P13686 325 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 CASP14P31944 242 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 SLC19A1P41440 591 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 SEPHS1P49903 392 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 DSC2Q02487 901 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 FOXM1Q08050 763 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 NIPAL4Q0D2K0 466 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 SEMA5AQ13591 1074 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 LAMB3Q13751 1172 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 LRP8Q14114 963 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ZNF235Q14590 738 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ARMC12Q5T9G4 340 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 E4F1Q66K89 784 aaPredicted RBP9.2□□□□□ -0.94
VCL-204ENST00000472585 ZNF765Q7L2R6 523 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 LYSMD3Q7Z3D4 306 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.2□□□□□ -0.94
VCL-204ENST00000472585 EXD1Q8NHP7 514 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ARRDC2Q8TBH0 407 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 STAMBPL1Q96FJ0 436 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 TCTN2Q96GX1 697 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ELMO2Q96JJ3 720 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 CSPG4P5Q96PW8 444 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 EIF3CQ99613 913 aaKnown RBP9.2□□□□□ -0.94
VCL-204ENST00000472585 NT5MQ9NPB1 228 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 RCOR3Q9P2K3 495 aaPredicted RBP9.2□□□□□ -0.94
VCL-204ENST00000472585 CPNE7Q9UBL6 633 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 CHKBQ9Y259 395 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 MN1Q10571 1320 aaPredicted RBP9.2□□□□□ -0.94
VCL-204ENST00000472585 MED13LQ71F56 2210 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 ARHGAP10A1A4S6 786 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 GOLGA6L3A6NEY3 463 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 LRRC10BA6NIK2 292 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 PRPSAP2O60256 369 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 NUAK1O60285 661 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 SPAG6O75602 509 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 CREG1O75629 220 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 KIAA0754O94854 1291 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 RARAP10276 462 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 F3P13726 295 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 BRAFP15056 766 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 ZNF8P17098 575 aaPredicted RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 TYRP1P17643 537 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 HSPA9P38646 679 aaKnown RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 MMP13P45452 471 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 EPHA4P54764 986 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 PPP1CAP62136 330 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 DPYSL2Q16555 572 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 SMTNL2Q2TAL5 461 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 PRR30Q53SZ7 412 aaPredicted RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 MARC1Q5VT66 337 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 FAM199XQ6PEV8 388 aaPredicted RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 CERS6Q6ZMG9 384 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 USP45Q70EL2 814 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 LZTR1Q8N653 840 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 SEC14L1Q92503 715 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 OR6C1Q96RD1 312 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 ERGIC2Q96RQ1 377 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 STN1Q9H668 368 aaKnown RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 MLXIPLQ9NP71 852 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 ACSS2Q9NR19 701 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 PARVAQ9NVD7 372 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 VPS18Q9P253 973 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 ATXN10Q9UBB4 475 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 LIMA1Q9UHB6 759 aaKnown RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 G3BP2Q9UN86 482 aaKnown RBP9.19□□□□□ -0.94
VCL-204ENST00000472585 ZNF451Q9Y4E5 1061 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 NF1P21359 2839 aa9.19□□□□□ -0.94
VCL-204ENST00000472585 HIVEP1P15822 2718 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 LILRA5A6NI73 299 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 LGALS16A8MUM7 142 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 GRID2O43424 1007 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 DPM1O60762 260 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 RECKO95980 971 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 FTLP02792 175 aaPredicted RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 CD48P09326 243 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 FGF5P12034 268 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 XRCC1P18887 633 aaPredicted RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 SPINT3P49223 89 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 CCL11P51671 97 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 RPS18P62269 152 aaKnown RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 CHAF1BQ13112 559 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 BECN1Q14457 450 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 NR6A1Q15406 480 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 KHDC1Q4VXA5 237 aaKnown RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 ZRANB3Q5FWF4 1079 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 CT47A1Q5JQC4 288 aaPredicted RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 RALGPS1Q5JS13 557 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 FKBP15Q5T1M5 1219 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 HENMT1Q5T8I9 393 aaKnown RBP9.18□□□□□ -0.94
VCL-204ENST00000472585 CPZQ66K79 652 aa9.18□□□□□ -0.94
VCL-204ENST00000472585 ALG1LQ6GMV1 187 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms