RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 TNFRSF10CO14798 259 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 GPR39O43194 453 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 MAGEC1O60732 1142 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 AP2A2O94973 939 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 PRSS56P0CW18 603 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 RALBP11234 206 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 CD9P21926 228 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 GABRB3P28472 473 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 POLD2P49005 469 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 SRSF5Q13243 272 aaKnown RBP20.58■□□□□ 0.89
BRAF-202ENST00000469930 LYSMD4Q5XG99 296 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 ZC3H14Q6PJT7 736 aaKnown RBP20.58■□□□□ 0.89
BRAF-202ENST00000469930 LRIG3Q6UXM1 1119 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 CEP68Q76N32 757 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 PPM1NQ8N819 430 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 ZNF514Q96K75 400 aaPredicted RBP20.58■□□□□ 0.89
BRAF-202ENST00000469930 PKNOX2Q96KN3 472 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 IRF2BPLQ9H1B7 796 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 P2RY12Q9H244 342 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 SLC17A4Q9Y2C5 497 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 PCDHB1Q9Y5F3 818 aa20.58■□□□□ 0.89
BRAF-202ENST00000469930 EXOC1LA0A1B0GW35 172 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 F8W8V4 182 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 DYNC1I1O14576 645 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 PRMT5O14744 637 aaPredicted RBP20.57■□□□□ 0.88
BRAF-202ENST00000469930 ESR1P03372 595 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 IVLP07476 585 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 CD38P28907 300 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 CD151P48509 253 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 SERPINB9P50453 376 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 CLDN2P57739 230 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 B4GALNT1Q00973 533 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 TMEM115Q12893 351 aaPredicted RBP20.57■□□□□ 0.88
BRAF-202ENST00000469930 SIM2Q14190 667 aaPredicted RBP20.57■□□□□ 0.88
BRAF-202ENST00000469930 PTK2BQ14289 1009 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 CASP8Q14790 479 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 NFATC4Q14934 902 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 ADGRD1Q6QNK2 874 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 STRA8Q7Z7C7 330 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 CROCCP2Q86T23 111 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 CTAGE3PQ8IX95 158 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 DEFB119Q8N690 84 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 OTUD6BQ8N6M0 293 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 SNX19Q92543 992 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 RHOJQ9H4E5 214 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 VIPAS39Q9H9C1 493 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 TM9SF3Q9HD45 589 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 TXNDC16Q9P2K2 825 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 SUSD2Q9UGT4 822 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 GPR34Q9UPC5 381 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 PSAT1Q9Y617 370 aa20.57■□□□□ 0.88
BRAF-202ENST00000469930 TNRC6BQ9UPQ9 1833 aaKnown RBP20.57■□□□□ 0.88
BRAF-202ENST00000469930 H3BMM5 538 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 CHUKO15111 745 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 HAUS5O94927 633 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 GSTM1P09488 218 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 ATP1B2P14415 290 aaPredicted RBP20.56■□□□□ 0.88
BRAF-202ENST00000469930 MSH3P20585 1137 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 CNTFP26441 200 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 HTR1BP28222 390 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 GCAP28676 217 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 MSH2P43246 934 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 MPP1Q00013 466 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 GSTM4Q03013 218 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 MACC1Q6ZN28 852 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 Q6ZSR6 202 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 MICALCLQ6ZW33 695 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 ADGRG6Q86SQ4 1221 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 LDB1Q86U70 411 aaPredicted RBP20.56■□□□□ 0.88
BRAF-202ENST00000469930 ZC3HC1Q86WB0 502 aaKnown RBP20.56■□□□□ 0.88
BRAF-202ENST00000469930 RIBC1Q8N443 379 aaPredicted RBP20.56■□□□□ 0.88
BRAF-202ENST00000469930 KLHDC7BQ96G42 594 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 DCUN1D1Q96GG9 259 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 SLC6A18Q96N87 628 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 PAFAH2Q99487 392 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 RBBP8Q99708 897 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 LGR4Q9BXB1 951 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 PILRBQ9UKJ0 227 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 PLAAQ9Y263 795 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 OR1A2Q9Y585 309 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 DNMT3AQ9Y6K1 912 aaPredicted RBP20.56■□□□□ 0.88
BRAF-202ENST00000469930 OAS3Q9Y6K5 1087 aaKnown RBP20.56■□□□□ 0.88
BRAF-202ENST00000469930 ABCA7Q8IZY2 2146 aa20.56■□□□□ 0.88
BRAF-202ENST00000469930 THADAQ6YHU6 1953 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 VILLO15195 856 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 INPP4BO15327 924 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 BCAT2O15382 392 aaPredicted RBP20.55■□□□□ 0.88
BRAF-202ENST00000469930 SHBGP04278 402 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 INHBAP08476 426 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 GNSP15586 552 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 SPRP35270 261 aaPredicted RBP20.55■□□□□ 0.88
BRAF-202ENST00000469930 DHPSP49366 369 aaPredicted RBP20.55■□□□□ 0.88
BRAF-202ENST00000469930 EFTUD2Q15029 972 aaKnown RBP eCLIP20.55■□□□□ 0.88
BRAF-202ENST00000469930 BCL7AQ4VC05 210 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 KHDC1Q4VXA5 237 aaKnown RBP20.55■□□□□ 0.88
BRAF-202ENST00000469930 ZNF789Q5FWF6 425 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 HDXQ7Z353 690 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 RABEPKQ7Z6M1 372 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 SYT12Q8IV01 421 aa20.55■□□□□ 0.88
BRAF-202ENST00000469930 RGL4Q8IZJ4 473 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms