RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 C7orf26Q96N11 449 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 QRFPRQ96P65 431 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 CMKLR1Q99788 373 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 NDST4Q9H3R1 872 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 BPIFA1Q9NP55 256 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 MKKSQ9NPJ1 570 aaPredicted RBP2.09□□□□□ -2.07
CCDC93-205ENST00000466171 SNTG1Q9NSN8 517 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 PPP1R14DQ9NXH3 145 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 HCN3Q9P1Z3 774 aa2.09□□□□□ -2.07
CCDC93-205ENST00000466171 SLC25A10Q9UBX3 287 aaPredicted RBP2.09□□□□□ -2.07
CCDC93-205ENST00000466171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.09□□□□□ -2.07
CCDC93-205ENST00000466171 LAS1LQ9Y4W2 734 aaKnown RBP2.09□□□□□ -2.07
CCDC93-205ENST00000466171 RUSC2Q8N2Y8 1516 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 A0A087X0M5 115 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 A0A1B0GX30 115 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 FSD2A1L4K1 749 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 PI4KAP2A4QPH2 592 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 H7C423 109 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 IFNL4K9M1U5 179 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 AP3D1O14617 1153 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 TCERG1O14776 1098 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 DCXO43602 365 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 ZBED4O75132 1171 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 GFPT2O94808 682 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 SORBS2O94875 1100 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 SEC31AO94979 1220 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 ERVK-10P10266 1014 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 ZNF26P17031 533 aaPredicted RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 EDN2P20800 178 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 MAOAP21397 527 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 BDNFP23560 247 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 CHMP24386 653 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 POU1F1P28069 291 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 MAPK4P31152 587 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 HOXC8P31273 242 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 ARL3P36405 182 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 RGS2P41220 211 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 CASP2P42575 452 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 METAP2P50579 478 aaKnown RBP eCLIP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 RARSP54136 660 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 EIF5P55010 431 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 RPS3AP61247 264 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 DCAF7P61962 342 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 PPP2R5BQ15173 497 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 MED22Q15528 200 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 UGP2Q16851 508 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 PRICKLE4Q2TBC4 344 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 EIF2S3LQ2VIR3 472 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 GGNBP1Q5YKI7 109 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 OR7E24Q6IFN5 339 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 LRRC8EQ6NSJ5 796 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 C17orf99Q6UX52 265 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 ZNF704Q6ZNC4 412 aaPredicted RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 TMTC3Q6ZXV5 915 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 PDILTQ8N807 584 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 DDHD1Q8NEL9 900 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 TRIM58Q8NG06 486 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 ETNPPLQ8TBG4 499 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 KLHL29Q96CT2 875 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 LINGO1Q96FE5 620 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 POM121L2Q96KW2 1035 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 NEUROD6Q96NK8 337 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 BBS4Q96RK4 519 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 PIP5K1AQ99755 562 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 MCRIP2Q9BUT9 160 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 CDK19Q9BWU1 502 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 FTOQ9C0B1 505 aaKnown RBP eCLIP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 RANBP17Q9H2T7 1088 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 PLEKHA4Q9H4M7 779 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 BICC1Q9H694 974 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 ESRP2Q9H6T0 727 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 MAGEE1Q9HCI5 957 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 FGF22Q9HCT0 170 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 GPR108Q9NPR9 543 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 RPS10P5Q9NQ39 176 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 EIF2B3Q9NR50 452 aaKnown RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 TBC1D22BQ9NU19 505 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 C2orf42Q9NWW7 574 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 KIAA1456Q9P272 454 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 HSPB7Q9UBY9 170 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 FBXO2Q9UK22 296 aaPredicted RBP2.08□□□□□ -2.08
CCDC93-205ENST00000466171 FAM96BQ9Y3D0 163 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 PIAS3Q9Y6X2 628 aa2.08□□□□□ -2.08
CCDC93-205ENST00000466171 COL5A2P05997 1499 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 SMCHD1A6NHR9 2005 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 FAM237BA0A1B0GVD1 139 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ANKRD18BA2A2Z9 1011 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 NPIPB15A6NHN6 443 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 LRRC53A6NM62 1247 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 EIF3CLB5ME19 914 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 TGFB1I1O43294 461 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 TNFSF14O43557 240 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 DOK2O60496 412 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ZNF821O75541 412 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 TMEM63AO94886 807 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 DDX58O95786 925 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 MT-CYBP00156 380 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 LDHCP07864 332 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 CYC1P08574 325 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 FAM106CPP0CH98 169 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms