RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 PDFQ9HBH1 243 aa9.42□□□□□ -0.9
ATG3-203ENST00000465980 FAM153AQ9UHL3 310 aa9.42□□□□□ -0.9
ATG3-203ENST00000465980 PCDHGA1Q9Y5H4 931 aa9.42□□□□□ -0.9
ATG3-203ENST00000465980 ZFC3H1O60293 1989 aaKnown RBP9.42□□□□□ -0.9
ATG3-203ENST00000465980 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 FPGTO14772 594 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 AP1G1O43747 822 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 PIGNO95427 931 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 NFKB1P19838 968 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 PSMB4P28070 264 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 CD68P34810 354 aaPredicted RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 HSPA9P38646 679 aaKnown RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 CDK16Q00536 496 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 SEMG2Q02383 582 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 SLC10A7Q0GE19 358 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 TARDBPQ13148 414 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATG3-203ENST00000465980 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 FZD2Q14332 565 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 RFTN1Q14699 578 aaPredicted RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 SLMAPQ14BN4 828 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 COL28A1Q2UY09 1125 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 TPRG1LQ5T0D9 272 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 FAM182AQ5T1J6 154 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 FAXCQ5TGI0 409 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 TMCO4Q5TGY1 634 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 MARC1Q5VT66 337 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 ANKRD22Q5VYY1 191 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 KYAT3Q6YP21 454 aaKnown RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 TTC7BQ86TV6 843 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 TMPRSS12Q86WS5 348 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 KLHDC8BQ8IXV7 354 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 MREGQ8N565 214 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 TAB3Q8N5C8 712 aaPredicted RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 MCUQ8NE86 351 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 OR4C6Q8NH72 309 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 AGAP3Q96P47 875 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 OSBPL1AQ9BXW6 950 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 FRMD8Q9BZ67 464 aaPredicted RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 TXLNGYQ9BZA5 131 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 GSX2Q9BZM3 304 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 GBA3Q9H227 469 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 EIF2B3Q9NR50 452 aaKnown RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 RBM22Q9NW64 420 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATG3-203ENST00000465980 DNAJB12Q9NXW2 375 aaKnown RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 LHX3Q9UBR4 397 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 UBA2Q9UBT2 640 aaPredicted RBP9.41□□□□□ -0.9
ATG3-203ENST00000465980 RSPH14Q9UHP6 348 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 PIEZO2Q9H5I5 2752 aa9.41□□□□□ -0.9
ATG3-203ENST00000465980 COL27A1Q8IZC6 1860 aaPredicted RBP9.4□□□□□ -0.9
ATG3-203ENST00000465980 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 TCRBV7S3A2A0A539 114 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 ERI2A8K979 691 aaKnown RBP9.4□□□□□ -0.9
ATG3-203ENST00000465980 E7EVH7 732 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PSMD3O43242 534 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 TSPAN6O43657 245 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 MMP20O60882 483 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PPFIA2O75334 1257 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 TMEM63AO94886 807 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 HLA-DQB2P05538 268 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 C1SP09871 688 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 ALPPL2P10696 532 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 XPAP23025 273 aaPredicted RBP9.4□□□□□ -0.9
ATG3-203ENST00000465980 IGFALSP35858 605 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 TNNT3P45378 269 aaPredicted RBP9.4□□□□□ -0.9
ATG3-203ENST00000465980 MMP13P45452 471 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 HNRNPKP61978 463 aaKnown RBP eCLIP9.4□□□□□ -0.9
ATG3-203ENST00000465980 RAD51Q06609 339 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PRPSAP1Q14558 356 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 TCEA2Q15560 299 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PCSK7Q16549 785 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PPP1R21Q6ZMI0 780 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 TMC3Q7Z5M5 1100 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PARGQ86W56 976 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 RELL1Q8IUW5 271 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 RBFAQ8N0V3 343 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 BBS5Q8N3I7 341 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PAF1Q8N7H5 531 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 ZNF548Q8NEK5 533 aaPredicted RBP9.4□□□□□ -0.9
ATG3-203ENST00000465980 CXorf40AQ8TE69 158 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 NUDT8Q8WV74 236 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 RAB7BQ96AH8 199 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 VOPP1Q96AW1 172 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 NXPE2Q96DL1 559 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 PPP1R2P1Q96PQ5 205 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 FCRL5Q96RD9 977 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 KLF6Q99612 283 aaPredicted RBP9.4□□□□□ -0.9
ATG3-203ENST00000465980 GORASP1Q9BQQ3 440 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
ATG3-203ENST00000465980 GLOD4Q9HC38 313 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 COQ6Q9Y2Z9 468 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 HS3ST3A1Q9Y663 406 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 AK5Q9Y6K8 562 aa9.4□□□□□ -0.9
ATG3-203ENST00000465980 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.91
ATG3-203ENST00000465980 SPTY2D1-AS1A0A0U1RR47 76 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 GOLGA6CA6NDK9 693 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 GOLGA6BA6NDN3 693 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 E7ESA3 106 aa9.39□□□□□ -0.91
ATG3-203ENST00000465980 TGFBR3LH3BV60 316 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms