RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	ZNF766	Q5HY98	468 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PXDC1	Q5TGL8	231 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PRSS45	Q7RTY3	260 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	KDELC2	Q7Z4H8	507 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PCGF5	Q86SE9	256 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZNF575	Q86XF7	245 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SCYL3	Q8IZE3	742 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CPXM2	Q8N436	756 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HORMAD2	Q8N7B1	307 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PLD5	Q8N7P1	536 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MIGA1	Q8NAN2	632 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TNIP2	Q8NFZ5	429 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RPL36AL	Q969Q0	106 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	KIF1BP	Q96EK5	621 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZFYVE19	Q96K21	471 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GLT1D1	Q96MS3	346 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TEFM	Q96QE5	360 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FRG2B	Q96QU4	278 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RAD9A	Q99638	391 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	WDR83	Q9BRX9	315 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HEMGN	Q9BXL5	484 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	AGXT2	Q9BYV1	514 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	USP44	Q9H0E7	712 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DCTPP1	Q9H773	170 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PNRC2	Q9NPJ4	139 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SEMA4B	Q9NPR2	832 aa	Predicted RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HYPK	Q9NX55	129 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TUBA8	Q9NY65	449 aa	Predicted RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GRHL1	Q9NZI5	618 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DLGAP2	Q9P1A6	1054 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TRMT112	Q9UI30	125 aa	Known RBP	5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CAMK2A	Q9UQM7	478 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	NAALADL1	Q9UQQ1	740 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CSMD1	Q96PZ7	3565 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MCM3AP	O60318	1980 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SIPA1L1	O43166	1804 aa		5.18	□□□□□ -1.58
CACNA1C-223	ENST00000465278	USP9Y	O00507	2555 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	URB1	O60287	2271 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PTPRB	P23467	1997 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PABPN1L	A6NDY0	278 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FAM157A	C9JC47	383 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HSPB6	O14558	160 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CAPN9	O14815	690 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TSPAN4	O14817	238 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ATG13	O75143	517 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CNOT3	O75175	753 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GJB5	O95377	273 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	BDNF	P23560	247 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GPD2	P43304	727 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ME1	P48163	572 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	NOVA1	P51513	510 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ARSF	P54793	590 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	UFM1	P61960	85 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MPP1	Q00013	466 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	IFT88	Q13099	833 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GPM6B	Q13491	265 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RPE65	Q16518	533 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	EDRF1	Q3B7T1	1238 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	EPC2	Q52LR7	807 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZNF667	Q5HYK9	610 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MANEA	Q5SRI9	462 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	IL20RB	Q6UXL0	311 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TMCO2	Q7Z6W1	182 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DEFB128	Q7Z7B8	93 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ITPRIP	Q8IWB1	547 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PDILT	Q8N807	584 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TEX19	Q8NA77	164 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZCCHC10	Q8TBK6	192 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HDAC7	Q8WUI4	952 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DNAAF4	Q8WXU2	420 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RMDN2	Q96LZ7	410 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	POLDIP3	Q9BY77	421 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FOXP1	Q9H334	677 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RWDD1	Q9H446	243 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	JMJD4	Q9H9V9	463 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PCDHB16	Q9NRJ7	776 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CGN	Q9P2M7	1197 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SLC25A10	Q9UBX3	287 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FBXO9	Q9UK97	447 aa	Predicted RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HS3ST3B1	Q9Y662	390 aa		5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DDX49	Q9Y6V7	483 aa	Known RBP	5.17	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SVIL	O95425	2214 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	C17orf113	A0A1B0GUU1	675 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PI4KAP2	A4QPH2	592 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	STMND1	H3BQB6	276 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PES1	O00541	588 aa	Known RBP	5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MBD4	O95243	580 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RET	P07949	1114 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CCDC159	P0C7I6	412 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FBL	P22087	321 aa	Known RBP	5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	RFC1	P35251	1148 aa	Predicted RBP	5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	KRT9	P35527	623 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CLCNKB	P51801	687 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GSC	P56915	257 aa	Predicted RBP	5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	IRX1	P78414	480 aa	Predicted RBP	5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	EFNB1	P98172	346 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	NUCB1	Q02818	461 aa		5.16	□□□□□ -1.58
CACNA1C-223	ENST00000465278	INPP5J	Q15735	1006 aa	Predicted RBP	5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms