RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 STK40Q8N2I9 435 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 CENPNQ96H22 339 aaPredicted RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 GPR22Q99680 433 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 NDEL1Q9GZM8 345 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 C20orf27Q9GZN8 174 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 TRMT13Q9NUP7 481 aaKnown RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 C10orf71Q711Q0 1435 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 BRWD1Q9NSI6 2320 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 AURKAO14965 403 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 FUT4P22083 530 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 WARSP23381 471 aaKnown RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 CORO1AP31146 461 aaKnown RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 LAPTM5Q13571 262 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 XKR6Q5GH73 641 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 SPANXN2Q5MJ10 180 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 KCTD8Q6ZWB6 473 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 USP50Q70EL3 339 aaPredicted RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 ZNF605Q86T29 641 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 SLCO6A1Q86UG4 719 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 LRRC49Q8IUZ0 686 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 NPWQ8N729 165 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 UBASH3BQ8TF42 649 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 FBXL20Q96IG2 436 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 FAXDC2Q96IV6 333 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 FCRL5Q96RD9 977 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 TMEM209Q96SK2 561 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 PNPLA8Q9NP80 782 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 PDLIM7Q9NR12 457 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 ADPRHL2Q9NX46 363 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 CD84Q9UIB8 345 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 SH3GLB1Q9Y371 365 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 MYH14Q7Z406 1995 aaKnown RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 POU2F1P14859 743 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 EPORP19235 508 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 TTKP33981 857 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 SOX6P35712 828 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 KCNQ1P51787 676 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 DGKEP52429 567 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 HPCAP84074 193 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 GNA12Q03113 381 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 PRKCQQ04759 706 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 CNTN1Q12860 1018 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 SFSWAPQ12872 951 aaKnown RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 CCNIQ14094 377 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 DPYSQ14117 519 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 FBXL22Q6P050 247 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 PAGE2Q7Z2X7 111 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 C14orf80Q86SX3 495 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 SLC47A1Q96FL8 570 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 NSUN5Q96P11 429 aaKnown RBP9.01□□□□□ -0.97
HPS4-208ENST00000464362 COPS8Q99627 209 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 ACBD6Q9BR61 282 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 EBPLQ9BY08 206 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 MOCS1Q9NZB8 636 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 CCDC88AQ3V6T2 1871 aa9.01□□□□□ -0.97
HPS4-208ENST00000464362 SF3B1O75533 1304 aaKnown RBP eCLIP9.01□□□□□ -0.97
HPS4-208ENST00000464362 COL1A2P08123 1366 aa9□□□□□ -0.97
HPS4-208ENST00000464362 PDZK1P1A8MUH7 402 aa9□□□□□ -0.97
HPS4-208ENST00000464362 TFECO14948 347 aaPredicted RBP9□□□□□ -0.97
HPS4-208ENST00000464362 KPNA6O60684 536 aa9□□□□□ -0.97
HPS4-208ENST00000464362 RNASEH2AO75792 299 aaKnown RBP9□□□□□ -0.97
HPS4-208ENST00000464362 CYP7B1O75881 506 aa9□□□□□ -0.97
HPS4-208ENST00000464362 MED26O95402 600 aa9□□□□□ -0.97
HPS4-208ENST00000464362 PRAMEF1O95521 474 aa9□□□□□ -0.97
HPS4-208ENST00000464362 UGT2B4P06133 528 aa9□□□□□ -0.97
HPS4-208ENST00000464362 THRBP10828 461 aa9□□□□□ -0.97
HPS4-208ENST00000464362 GNAZP19086 355 aa9□□□□□ -0.97
HPS4-208ENST00000464362 GNPDA1P46926 289 aa9□□□□□ -0.97
HPS4-208ENST00000464362 MTTPP55157 894 aa9□□□□□ -0.97
HPS4-208ENST00000464362 TLR1Q15399 786 aa9□□□□□ -0.97
HPS4-208ENST00000464362 FAM110CQ1W6H9 321 aa9□□□□□ -0.97
HPS4-208ENST00000464362 PRSS55Q6UWB4 352 aaPredicted RBP9□□□□□ -0.97
HPS4-208ENST00000464362 RD3Q7Z3Z2 195 aa9□□□□□ -0.97
HPS4-208ENST00000464362 CEP97Q8IW35 865 aa9□□□□□ -0.97
HPS4-208ENST00000464362 CAPSLQ8WWF8 208 aa9□□□□□ -0.97
HPS4-208ENST00000464362 EPS8L2Q9H6S3 715 aa9□□□□□ -0.97
HPS4-208ENST00000464362 ZBTB26Q9HCK0 441 aa9□□□□□ -0.97
HPS4-208ENST00000464362 PTTG2Q9NZH5 202 aa9□□□□□ -0.97
HPS4-208ENST00000464362 IKZF3Q9UKT9 509 aa9□□□□□ -0.97
HPS4-208ENST00000464362 ZFP37Q9Y6Q3 630 aaPredicted RBP9□□□□□ -0.97
HPS4-208ENST00000464362 TRIM43BA6NCK2 446 aa9□□□□□ -0.97
HPS4-208ENST00000464362 OR2AG2A6NM03 316 aa9□□□□□ -0.97
HPS4-208ENST00000464362 DIRAS1O95057 198 aa9□□□□□ -0.97
HPS4-208ENST00000464362 PRDX6P30041 224 aa9□□□□□ -0.97
HPS4-208ENST00000464362 COL9A2Q14055 689 aaPredicted RBP9□□□□□ -0.97
HPS4-208ENST00000464362 VARS2Q5ST30 1063 aaKnown RBP9□□□□□ -0.97
HPS4-208ENST00000464362 TLDC1Q6P9B6 456 aa9□□□□□ -0.97
HPS4-208ENST00000464362 AHSA2Q719I0 299 aa9□□□□□ -0.97
HPS4-208ENST00000464362 ZNF467Q7Z7K2 595 aaPredicted RBP9□□□□□ -0.97
HPS4-208ENST00000464362 PHACTR4Q8IZ21 702 aa9□□□□□ -0.97
HPS4-208ENST00000464362 TERB1Q8NA31 727 aa9□□□□□ -0.97
HPS4-208ENST00000464362 ZFYVE1Q9HBF4 777 aa9□□□□□ -0.97
HPS4-208ENST00000464362 EHD3Q9NZN3 535 aa9□□□□□ -0.97
HPS4-208ENST00000464362 CACNA1SQ13698 1873 aa9□□□□□ -0.97
HPS4-208ENST00000464362 A0A1W2PPW3 197 aa9□□□□□ -0.97
HPS4-208ENST00000464362 SLC7A4O43246 635 aa9□□□□□ -0.97
HPS4-208ENST00000464362 NPHS1O60500 1241 aa9□□□□□ -0.97
HPS4-208ENST00000464362 RSL1D1O76021 490 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms