RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 GALNT1Q10472 559 aaPredicted RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 UGT3A2Q3SY77 523 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 RTL10Q7L3V2 364 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 SNX20Q7Z614 316 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 FBXO39Q8N4B4 442 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 NKAPQ8N5F7 415 aaKnown RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 SNX31Q8N9S9 440 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 CMTM5Q96DZ9 223 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 MRGPRX3Q96LB0 322 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 LYSMD1Q96S90 227 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 CCDC28BQ9BUN5 200 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 MMADHCQ9H3L0 296 aaPredicted RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 MEAF6Q9HAF1 191 aa12.7□□□□□ -0.38
VAPB-203ENST00000463370 UTP6Q9NYH9 597 aaKnown RBP12.7□□□□□ -0.38
VAPB-203ENST00000463370 TRBV5-4A0A0C4DH59 114 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 PFDN6O15212 129 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CD9P21926 228 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 ACRV1P26436 265 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 PRDX3P30048 256 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 PBX2P40425 430 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 RAP1GDS1P52306 607 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 IL2P60568 153 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 GPM6BQ13491 265 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CUL3Q13618 768 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 TPRG1Q6ZUI0 275 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 SNX32Q86XE0 403 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 SCUBE1Q8IWY4 988 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 PELI3Q8N2H9 469 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CPSF7Q8N684 471 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 PCDH20Q8N6Y1 951 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 VN1R2Q8NFZ6 395 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 ZFYVE19Q96K21 471 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 KLHL32Q96NJ5 620 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 TRMOQ9BU70 441 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CPEB1Q9BZB8 566 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 BRD9Q9H8M2 597 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 RNPEPL1Q9HAU8 725 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 MID1IP1Q9NPA3 183 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 ZDHHC7Q9NXF8 308 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 TBC1D14Q9P2M4 693 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 MBD1Q9UIS9 605 aaPredicted RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 ERVW-1Q9UQF0 538 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 YBX2Q9Y2T7 364 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 HELZP42694 1942 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 TRPC5OSA6NMA1 111 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 KRT36O76013 467 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 POP4O95707 220 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 CYP17A1P05093 508 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 RB1P06400 928 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 C1SP09871 688 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 ITGALP20701 1170 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 SPAM1P38567 509 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 DHCR24Q15392 516 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 C18orf21Q32NC0 220 aaPredicted RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 DNAL1Q4LDG9 190 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 UGT3A1Q6NUS8 523 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CERS6Q6ZMG9 384 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 KIAA0907Q7Z7F0 614 aaPredicted RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 STK40Q8N2I9 435 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 LEMD2Q8NC56 503 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 HMGCLL1Q8TB92 370 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 PLEKHG4BQ96PX9 1271 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 PANX3Q96QZ0 392 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 TUBGCP5Q96RT8 1024 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CEP44Q9C0F1 390 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CLPBQ9H078 707 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 ZBTB26Q9HCK0 441 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 FBRSL1Q9HCM7 1045 aaKnown RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 SEMA4BQ9NPR2 832 aaPredicted RBP12.69□□□□□ -0.38
VAPB-203ENST00000463370 B4GALT6Q9UBX8 382 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 GIMAP2Q9UG22 337 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 CD84Q9UIB8 345 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 DHRS7Q9Y394 339 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 PPIL1Q9Y3C6 166 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 DNAJC15Q9Y5T4 150 aa12.69□□□□□ -0.38
VAPB-203ENST00000463370 OTOL1A6NHN0 477 aaPredicted RBP12.68□□□□□ -0.38
VAPB-203ENST00000463370 PDE5AO76074 875 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 SNUPNO95149 360 aaKnown RBP12.68□□□□□ -0.38
VAPB-203ENST00000463370 CTSLP07711 333 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 POM121L1PQ3SYA9 428 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 ATP13A5Q4VNC0 1218 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 PTRHD1Q6GMV3 140 aaKnown RBP12.68□□□□□ -0.38
VAPB-203ENST00000463370 CEP70Q8NHQ1 597 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 SMG7Q92540 1137 aaKnown RBP12.68□□□□□ -0.38
VAPB-203ENST00000463370 PIDD1Q9HB75 910 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 MARK1Q9P0L2 795 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 CRLS1Q9UJA2 301 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 ZNF225Q9UK10 706 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 APPL1Q9UKG1 709 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 WASF2Q9Y6W5 498 aa12.68□□□□□ -0.38
VAPB-203ENST00000463370 MTCL1Q9Y4B5 1905 aaKnown RBP12.68□□□□□ -0.38
VAPB-203ENST00000463370 CXorf51AA0A1B0GTR3 108 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 KLK8O60259 260 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 SLC25A14O95258 325 aaPredicted RBP12.67□□□□□ -0.38
VAPB-203ENST00000463370 TRIM16O95361 564 aa12.67□□□□□ -0.38
VAPB-203ENST00000463370 RPS17P08708 135 aaKnown RBP12.67□□□□□ -0.38
VAPB-203ENST00000463370 ZNF7P17097 686 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms