RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
HDAC4-208ENST00000463007 CNTN5O94779 1100 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 TCF3P15923 654 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 MYF6P23409 242 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 FSHRP23945 695 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 SHMT2P34897 504 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CAPGP40121 348 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 HALP42357 657 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 GSSP48637 474 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 DGKQP52824 942 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 OR4D1Q15615 310 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 ZNF829Q3KNS6 432 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-208ENST00000463007 RGMBQ6NW40 437 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 MILR1Q7Z6M3 343 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CNTN4Q8IWV2 1026 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 ZNF683Q8IZ20 524 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CLYBLQ8N0X4 340 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 OR13C4Q8NGS5 318 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 YIPF2Q9BWQ6 316 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 TUBB1Q9H4B7 451 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 ANAPC2Q9UJX6 822 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 PNMA8BQ9ULN7 279 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-208ENST00000463007 ZNF232Q9UNY5 417 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 FXYD1O00168 92 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 MAFKO60675 156 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 PORP16435 677 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-208ENST00000463007 TYMPP19971 482 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 AGXTP21549 392 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 FMO4P31512 558 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 HTR7P34969 479 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 ADRA1AP35348 466 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CCT8P50990 548 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 BCAP31P51572 246 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 PFKPQ01813 784 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 RGS21Q2M5E4 152 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CCDC117Q8IWD4 279 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CDYL2Q8N8U2 506 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 TRPV3Q8NET8 790 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 SNX19Q92543 992 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 EXOC2Q96KP1 924 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 UROC1Q96N76 676 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 TRIM15Q9C019 465 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 MIR1-1HGQ9H1L0 117 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 UTS2RQ9UKP6 389 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 ACTL7AQ9Y615 435 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 MIA3Q5JRA6 1907 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CLASP2O75122 1294 aaKnown RBP12.34□□□□□ -0.43
HDAC4-208ENST00000463007 POMCP01189 267 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 ASGR1P07306 291 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 OR4Q2P0C623 313 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CYP4B1P13584 511 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 IMPDH1P20839 514 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CCNCP24863 283 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 DSC1Q08554 894 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 R3HCC1LQ7Z5L2 792 aaKnown RBP12.34□□□□□ -0.43
HDAC4-208ENST00000463007 BIRC7Q96CA5 298 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 SLC30A3Q99726 388 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 GID8Q9NWU2 228 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 OSER1Q9NX31 292 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 UXTQ9UBK9 157 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-208ENST00000463007 VPS51Q9UID3 782 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 INVSQ9Y283 1065 aa12.34□□□□□ -0.43
HDAC4-208ENST00000463007 CCDC154A6NI56 674 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 KDM1AO60341 852 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 CBFA2T3O75081 653 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 B3GAT3O94766 335 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 PEX11BO96011 259 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 MAGEA8P43361 318 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 CD97P48960 835 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 SERPINH1P50454 418 aaKnown RBP12.33□□□□□ -0.44
HDAC4-208ENST00000463007 GEMP55040 296 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 SFSWAPQ12872 951 aaKnown RBP12.33□□□□□ -0.44
HDAC4-208ENST00000463007 SGO1Q5FBB7 561 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 TMTC4Q5T4D3 741 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 FAM45BPQ6NSW5 357 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 UGT3A1Q6NUS8 523 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 RAB44Q7Z6P3 723 aaPredicted RBP12.33□□□□□ -0.44
HDAC4-208ENST00000463007 MIB1Q86YT6 1006 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 RAVER1Q8IY67 606 aaKnown RBP12.33□□□□□ -0.44
HDAC4-208ENST00000463007 SLC7A5P1Q8MH63 180 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 FNDC5Q8NAU1 212 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 FAM45AQ8TCE6 357 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 HPS1Q92902 700 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 TAMM41Q96BW9 452 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 FAR2Q96K12 515 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 ABCG8Q9H221 673 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 CHD5Q8TDI0 1954 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 ACOX3O15254 700 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 LBPP18428 481 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 OPRL1P41146 370 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 GLYATQ6IB77 296 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 GALNT5Q7Z7M9 940 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 IGFN1Q86VF2 1251 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 FAM86B1Q8N7N1 296 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 SUN2Q9UH99 717 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 RNF112Q9ULX5 631 aa12.33□□□□□ -0.44
HDAC4-208ENST00000463007 WASH4PA8MWX3 477 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms