RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SLC35B2Q8TB61 432 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 PATE1Q8WXA2 126 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 LIN37Q96GY3 246 aaPredicted RBP15.22■□□□□ 0.03
VARS-219ENST00000461328 SLC46A1Q96NT5 459 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 FRMD8P1Q9BZ68 369 aaPredicted RBP15.22■□□□□ 0.03
VARS-219ENST00000461328 ATXN10Q9UBB4 475 aa15.22■□□□□ 0.03
VARS-219ENST00000461328 GLYATL1P3A0A0U1RQE8 302 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 C2orf81A6NN90 581 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 GRID2O43424 1007 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 LIASO43766 372 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 DNAJC6O75061 913 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 MTX2O75431 263 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 ZNF8P17098 575 aaPredicted RBP15.21■□□□□ 0.03
VARS-219ENST00000461328 ALDH4A1P30038 563 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 CCKBRP32239 447 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 PPM1FP49593 454 aaPredicted RBP15.21■□□□□ 0.03
VARS-219ENST00000461328 GDF10P55107 478 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 EIF3IQ13347 325 aaKnown RBP15.21■□□□□ 0.03
VARS-219ENST00000461328 SNX1Q13596 522 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 GTF2H3Q13889 308 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 PARP6Q2NL67 630 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 PLA2G4EQ3MJ16 856 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 AMZ1Q400G9 498 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 RAB11FIP2Q7L804 512 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 ZNF438Q7Z4V0 828 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 NAGSQ8N159 534 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 FBXO39Q8N4B4 442 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 C1orf54Q8WWF1 131 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 KCNE4Q8WWG9 221 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 ZMYND15Q9H091 742 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 OSGEPL1Q9H4B0 414 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 TRIM39Q9HCM9 518 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 IL17CQ9P0M4 197 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 ZNF148Q9UQR1 794 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 KCNK6Q9Y257 313 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 ARL5AQ9Y689 179 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 NBEAQ8NFP9 2946 aa15.21■□□□□ 0.03
VARS-219ENST00000461328 ZFYVE26Q68DK2 2539 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 GPR89AB7ZAQ6 455 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 PLD2O14939 933 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 NUAK1O60285 661 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 SNX2O60749 519 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 PPFIA2O75334 1257 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 ITGA2BP08514 1039 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 GPR89BP0CG08 455 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 LPOP22079 712 aaPredicted RBP15.2■□□□□ 0.02
VARS-219ENST00000461328 ADRA1AP35348 466 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 MLLT3P42568 568 aaPredicted RBP15.2■□□□□ 0.02
VARS-219ENST00000461328 LMAN1P49257 510 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 OR1D5P58170 312 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 B4GALNT1Q00973 533 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 TLE3Q04726 772 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 ITGA9Q13797 1035 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 TAF1AQ15573 450 aaPredicted RBP15.2■□□□□ 0.02
VARS-219ENST00000461328 CHRNA6Q15825 494 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 INSCQ1MX18 579 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 ATP13A5Q4VNC0 1218 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 PHF19Q5T6S3 580 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 RANBP10Q6VN20 620 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 ADGRG6Q86SQ4 1221 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 PIM3Q86V86 326 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 CCDC89Q8N998 374 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 PRR11Q96HE9 360 aaPredicted RBP15.2■□□□□ 0.02
VARS-219ENST00000461328 TTC25Q96NG3 672 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 VPS35Q96QK1 796 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 ZCCHC2Q9C0B9 1178 aaKnown RBP15.2■□□□□ 0.02
VARS-219ENST00000461328 LRRC40Q9H9A6 602 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 IL26Q9NPH9 171 aa15.2■□□□□ 0.02
VARS-219ENST00000461328 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.2■□□□□ 0.02
VARS-219ENST00000461328 FEZ2Q9UHY8 353 aaPredicted RBP15.2■□□□□ 0.02
VARS-219ENST00000461328 PCYT1BQ9Y5K3 369 aaPredicted RBP15.2■□□□□ 0.02
VARS-219ENST00000461328 E7EVH7 732 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 AGRPO00253 132 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 KLK10O43240 276 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 B4GAT1O43505 415 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 CEP104O60308 925 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 CDK14O94921 469 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 PRAMEF1O95521 474 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 METTL18O95568 372 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 CRTAMO95727 393 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 CPNE6O95741 557 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 JMJD7P0C870 316 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 GPR3P46089 330 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 PDE1BQ01064 536 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 SEPT6Q14141 434 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 NR1D2Q14995 579 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 BROXQ5VW32 411 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 LRRTM4Q86VH4 590 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 TRAPPC5Q8IUR0 188 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 OR4K2Q8NGD2 314 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 MAIP1Q8WWC4 291 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 STN1Q9H668 368 aaKnown RBP15.19■□□□□ 0.02
VARS-219ENST00000461328 RDH14Q9HBH5 336 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 LOXL2Q9Y4K0 774 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 CELSR3Q9NYQ7 3312 aa15.19■□□□□ 0.02
VARS-219ENST00000461328 ARHGEF17Q96PE2 2063 aaPredicted RBP15.18■□□□□ 0.02
VARS-219ENST00000461328 TRBV23OR9-2A0A075B6M9 112 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 CDRT15L2A8MXV6 281 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 KMOO15229 486 aa15.18■□□□□ 0.02
VARS-219ENST00000461328 PPM1DO15297 605 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms