RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 C15orf41Q9Y2V0 281 aa14□□□□□ -0.17
ERCC3-205ENST00000460485 FCF1Q9Y324 198 aaKnown RBP14□□□□□ -0.17
ERCC3-205ENST00000460485 TNPO3Q9Y5L0 923 aaKnown RBP14□□□□□ -0.17
ERCC3-205ENST00000460485 A0A1W2PRU2 124 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 A8MUI8 341 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 CCL22O00626 93 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 SUPT7LO94864 414 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PSMG1O95456 288 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 GFAPP14136 432 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 FMO4P31512 558 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 SPAM1P38567 509 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 NBL1P41271 181 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 ABL2P42684 1182 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 MRPL19P49406 292 aaKnown RBP13.99□□□□□ -0.17
ERCC3-205ENST00000460485 ACADVLP49748 655 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 STX1BP61266 288 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 POLR2LP62875 67 aaKnown RBP13.99□□□□□ -0.17
ERCC3-205ENST00000460485 AP2B1P63010 937 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 TIAL1Q01085 375 aaKnown RBP eCLIP13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PEX6Q13608 980 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 CCDC6Q16204 474 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 TTLL9Q3SXZ7 439 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PITRM1Q5JRX3 1037 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 VWA5B1Q5TIE3 1220 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 ANKS6Q68DC2 871 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 C22orf39Q6P5X5 142 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 TMEM207Q6UWW9 146 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 ADGRG6Q86SQ4 1221 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 LDB1Q86U70 411 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PIM3Q86V86 326 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 RAVER1Q8IY67 606 aaKnown RBP13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PELI3Q8N2H9 469 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PAF1Q8N7H5 531 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PTGR2Q8N8N7 351 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-205ENST00000460485 KYQ8NBH2 561 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 SMRP1Q8NCR6 262 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 SH3RF2Q8TEC5 729 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PTERQ96BW5 349 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 ECHDC3Q96DC8 303 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 LMLNQ96KR4 655 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 PLEKHG4BQ96PX9 1271 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 MCCC1Q96RQ3 725 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-205ENST00000460485 CLPBQ9H078 707 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 P2RY12Q9H244 342 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 SLC8A2Q9UPR5 921 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 TRAF6Q9Y4K3 522 aa13.99□□□□□ -0.17
ERCC3-205ENST00000460485 BBIP1A8MTZ0 92 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 SUPT3HB4E1H0 165 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 WASH3PC4AMC7 463 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 GIPC1O14908 333 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 GALR2O43603 387 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 SUPT3HO75486 399 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 POP4O95707 220 aaKnown RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 CHEK2O96017 543 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 S100BP04271 92 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 ASLP04424 464 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 RPS17P08708 135 aaKnown RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 CBSLP0DN79 551 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PCSK2P16519 638 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 ZNF30P17039 623 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 EPHA3P29320 983 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 CBSP35520 551 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 ID4P47928 161 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 CPA2P48052 419 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 CUL3Q13618 768 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PDCD2Q16342 344 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 UNC50Q53HI1 259 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 CDKL4Q5MAI5 379 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 C1orf146Q5VVC0 180 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 NXNQ6DKJ4 435 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PSAPL1Q6NUJ1 521 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PGM2L1Q6PCE3 622 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 TPGS1Q6ZTW0 290 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 TPRG1Q6ZUI0 275 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 ASCL5Q7RTU5 278 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 LYSMD3Q7Z3D4 306 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 HS6ST3Q8IZP7 471 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 APCDD1Q8J025 514 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PGAM4Q8N0Y7 254 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 SHKBP1Q8TBC3 707 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 WFDC5Q8TCV5 224 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 CD200R1Q8TD46 325 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 HCAR2Q8TDS4 363 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 WFIKKN2Q8TEU8 576 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 SGF29Q96ES7 293 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 RSRC1Q96IZ7 334 aaKnown RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 LRIG1Q96JA1 1093 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 NSMCE3Q96MG7 304 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 GPR21Q99679 349 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 THTPAQ9BU02 230 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PHF7Q9BWX1 381 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 SLC46A2Q9BY10 475 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 VCX3BQ9H321 246 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 EFCAB1Q9HAE3 211 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 TDP1Q9NUW8 608 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 NFKBIL1Q9UBC1 381 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-205ENST00000460485 DHRS7Q9Y394 339 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 ACTL7AQ9Y615 435 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PIKFYVEQ9Y2I7 2098 aa13.98□□□□□ -0.17
ERCC3-205ENST00000460485 PLXNB3Q9ULL4 1909 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms