RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 EFNB3Q15768 340 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 WSCD2Q2TBF2 565 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 C2orf76Q3KRA6 126 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 TDRD12Q587J7 1177 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 B3GNT6Q6ZMB0 384 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 IKBIPQ70UQ0 350 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 GSTA5Q7RTV2 222 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 PPP1R42Q7Z4L9 355 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ZER1Q7Z7L7 766 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 FJX1Q86VR8 437 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ZC3HC1Q86WB0 502 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 CCDC13Q8IYE1 715 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 FBXL14Q8N1E6 418 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 C17orf53Q8N3J3 647 aaPredicted RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 C10orf53Q8N6V4 93 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 NEK9Q8TD19 979 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 KRT35Q92764 455 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ATP6V0A1Q93050 837 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 MIB2Q96AX9 1013 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ZNF653Q96CK0 615 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 PPP1R13BQ96KQ4 1090 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 LRFN5Q96NI6 719 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 NEK1Q96PY6 1258 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 TMEM237Q96Q45 408 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 FAM110AQ9BQ89 295 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 SLC25A33Q9BSK2 321 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 KCNN2Q9H2S1 579 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 TNMDQ9H2S6 317 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 RPAP3Q9H6T3 665 aaPredicted RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 VPS37BQ9H9H4 285 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 ERVMER34-1Q9H9K5 563 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 COPS7BQ9H9Q2 264 aaPredicted RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 GPR108Q9NPR9 543 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 SEPT11Q9NVA2 429 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 MCM9Q9NXL9 1143 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 COQ3Q9NZJ6 369 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 EHD2Q9NZN4 543 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 DLGAP2Q9P1A6 1054 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 LAMP5Q9UJQ1 280 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 RCOR1Q9UKL0 485 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 CFAP45Q9UL16 551 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 AGO1Q9UL18 857 aaKnown RBP3.38□□□□□ -1.87
VPS8-215ENST00000460158 CDC14AQ9UNH5 594 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 PAM16Q9Y3D7 125 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 RAD54L2Q9Y4B4 1467 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 PIK3R4Q99570 1358 aa3.38□□□□□ -1.87
VPS8-215ENST00000460158 A0A1W2PRG0 241 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 LINC01553A4QN01 128 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 WNT9BO14905 357 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 ZBTB14O43829 449 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 KLHL41O60662 606 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 FMO6PO60774 539 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 HNRNPCL1O60812 293 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 NOL3O60936 208 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 SEC22BO75396 215 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 SERPINI2O75830 405 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 FTCDO95954 541 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 CH25HO95992 272 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 SNRNP70P08621 437 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 FERP16591 822 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 CD58P19256 250 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 C21orf33P30042 268 aaPredicted RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 HNRNPH1P31943 449 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 CDKN2AP42771 156 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 MATR3P43243 847 aaKnown RBP eCLIP3.37□□□□□ -1.87
VPS8-215ENST00000460158 KCNJ4P48050 445 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 HTR6P50406 440 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 TKTL1P51854 596 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 RRP1P56182 461 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 BNC1Q01954 994 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 DSC1Q08554 894 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 GOLGA8DPQ0D2H9 430 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 EIF2S3LQ2VIR3 472 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 USP41Q3LFD5 358 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 BMP2KLQ5H9B9 411 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 WDR73Q6P4I2 378 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 NCEH1Q6PIU2 408 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 DLK2Q6UY11 383 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 PLEKHM3Q6ZWE6 761 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 WDR63Q8IWG1 891 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 ARHGAP12Q8IWW6 846 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 IPMKQ8NFU5 416 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 CTCFLQ8NI51 663 aaPredicted RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 KIAA1524Q8TCG1 905 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 CREB3L4Q8TEY5 395 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 FAM120BQ96EK7 910 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 CDCA5Q96FF9 252 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 CABS1Q96KC9 395 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 FAM210AQ96ND0 272 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 CITED2Q99967 270 aaPredicted RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 SLX1AQ9BQ83 275 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 TMEM47Q9BQJ4 181 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 NTPCRQ9BSD7 190 aaKnown RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 HAUS8Q9BT25 410 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 C1orf21Q9H246 121 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 MMADHCQ9H3L0 296 aaPredicted RBP3.37□□□□□ -1.87
VPS8-215ENST00000460158 THAP9Q9H5L6 903 aa3.37□□□□□ -1.87
VPS8-215ENST00000460158 AIPL1Q9NZN9 384 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms