RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 ZDHHC12Q96GR4 267 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 KCTD15Q96SI1 283 aaPredicted RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 PCDHB18PQ96TA0 734 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 MGME1Q9BQP7 344 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 POLR1EQ9GZS1 481 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 BRD8Q9H0E9 1235 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ZNF768Q9H5H4 540 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 RMI1Q9H9A7 625 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ARFGAP3Q9NP61 516 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 NT5MQ9NPB1 228 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 PKD2L2Q9NZM6 624 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 DNPEPQ9ULA0 475 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 VPS9D1Q9Y2B5 631 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 PCDHGA6Q9Y5G7 932 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ANKRD17O75179 2603 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 SHANK1Q9Y566 2161 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 ABCA12Q86UK0 2595 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 A0A0J9YYE9 177 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 C1orf232A0A0U1RR37 186 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 F5H423 210 aaPredicted RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 ZNF185O15231 689 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 KIF1CO43896 1103 aaKnown RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 DNAJC6O75061 913 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 SORBS2O94875 1100 aaKnown RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 CLDN1O95832 211 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 TRBC1P01850 177 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 C9P02748 559 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PDHA1P08559 390 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 FGF5P12034 268 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PTPN4P29074 926 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 SERPINB6P35237 376 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 CAPZBP47756 277 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PTSQ03393 145 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 CDK18Q07002 472 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 RAPSNQ13702 412 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PLCL1Q15111 1095 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 SMTNL2Q2TAL5 461 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 DPCR1Q3MIW9 517 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.78□□□□□ -1.16
HPS4-207ENST00000459918 TCP11X2Q5H9J9 407 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 RALGPS1Q5JS13 557 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 ALS2CLQ60I27 953 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 FAM199XQ6PEV8 388 aaPredicted RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 TMEM26Q6ZUK4 368 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 ZNF765Q7L2R6 523 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 TECPR1Q7Z6L1 1165 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 TMEM126BQ8IUX1 230 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PGBD5Q8N414 524 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 LPCAT1Q8NF37 534 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 CCHCR1Q8TD31 782 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 NSMCE3Q96MG7 304 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PLEKHG4BQ96PX9 1271 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 SMIM14Q96QK8 99 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 MCCC1Q96RQ3 725 aaPredicted RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 RUFY1Q96T51 708 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 AGPAT1Q99943 283 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 MLPHQ9BV36 600 aaPredicted RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 GPR87Q9BY21 358 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 SLC7A5P2Q9GIP4 190 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 ILKAPQ9H0C8 392 aaPredicted RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 GANQ9H2C0 597 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PARVAQ9NVD7 372 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 TRIM10Q9UDY6 481 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 ERRFI1Q9UJM3 462 aaPredicted RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 SNX7Q9UNH6 387 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 SLC5A6Q9Y289 635 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 SIK3Q9Y2K2 1263 aa7.78□□□□□ -1.16
HPS4-207ENST00000459918 PCDHGA9Q9Y5G4 932 aaKnown RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 PCYT1BQ9Y5K3 369 aaPredicted RBP7.78□□□□□ -1.16
HPS4-207ENST00000459918 UBA6A0AVT1 1052 aaPredicted RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 ARHGAP10A1A4S6 786 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 KRT86O43790 486 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 CPNE3O75131 537 aaKnown RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 SCRG1O75711 98 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 TMEM63AO94886 807 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 SLC25A14O95258 325 aaPredicted RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 CLDN7O95471 211 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 KLK3P07288 261 aaPredicted RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 CCDC172P0C7W6 258 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 VCLP18206 1134 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 RPL10P27635 214 aaKnown RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 HALP42357 657 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 PTGIRP43119 386 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 ZNF135P52742 658 aaPredicted RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 STC1P52823 247 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 DRG2P55039 364 aaKnown RBP7.77□□□□□ -1.17
HPS4-207ENST00000459918 JAM2P57087 298 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 OGDHQ02218 1023 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 ACY1Q03154 408 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 IL10RAQ13651 578 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 GPR18Q14330 331 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 KCNAB1Q14722 419 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 ANKRD20A8PQ5CZ79 823 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 ZNF569Q5MCW4 686 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 PWWP2BQ6NUJ5 590 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 DPY19L2P1Q6NXN4 242 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 PRSS42Q7Z5A4 293 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 IQCKQ8N0W5 287 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 ANKRD20A12PQ8NF67 263 aa7.77□□□□□ -1.17
HPS4-207ENST00000459918 PIH1D2Q8WWB5 315 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms