RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 GRIA2P42262 883 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 GPR15P49685 360 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 CDK9P50750 372 aaKnown RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 NUP107P57740 925 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 EMX2Q04743 252 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 RALGDSQ12967 914 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 VEPH1Q14D04 833 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ATP6AP1Q15904 470 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 RBBP7Q16576 425 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 PTPRNQ16849 979 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 TTLL9Q3SXZ7 439 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 CDKL4Q5MAI5 379 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 NADSYN1Q6IA69 706 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 PAQR3Q6TCH7 311 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 CYHR1Q6ZMK1 362 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 LRRC8DQ7L1W4 858 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 SAPCD2Q86UD0 394 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 NPAS4Q8IUM7 802 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ERI1Q8IV48 349 aaKnown RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 CROCCP3Q8IVE0 287 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 SLC15A3Q8IY34 581 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 LRRC43Q8N309 656 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 SLC43A3Q8NBI5 491 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ATAD1Q8NBU5 361 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 OR4K2Q8NGD2 314 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 OR13C4Q8NGS5 318 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ZNF420Q8TAQ5 688 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 DIS3LQ8TF46 1054 aaKnown RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 TFAP2CQ92754 450 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 SDCCAG3Q96C92 435 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 MOCOSQ96EN8 888 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 TRMT2BQ96GJ1 504 aaKnown RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 HHIPL1Q96JK4 782 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 TTPALQ9BTX7 342 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 UNKQ9C0B0 810 aaKnown RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 PCDHAC1Q9H158 963 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 MAGEE1Q9HCI5 957 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ACSS2Q9NR19 701 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 TRMT13Q9NUP7 481 aaKnown RBP8.77□□□□□ -1.01
HDAC3-202ENST00000459727 CD274Q9NZQ7 290 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 TRPM5Q9NZQ8 1165 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ATXN10Q9UBB4 475 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 GNPTGQ9UJJ9 305 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 APPL1Q9UKG1 709 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 PCDHA9Q9Y5H5 950 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 RAI2Q9Y5P3 530 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 SLC30A1Q9Y6M5 507 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 ANKRD36A6QL64 1941 aa8.77□□□□□ -1.01
HDAC3-202ENST00000459727 MIA3Q5JRA6 1907 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 RNF103-CHMP3A0A140T963 221 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ATP6AP2A0A1C7CYW4 349 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 TRIM64CA6NLI5 447 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ANKRD66B4E2M5 251 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 FXYD1O00168 92 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 SLC28A1O00337 649 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 PRMT5O14744 637 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ARPC2O15144 300 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 NOL3O60936 208 aaKnown RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 DEAF1O75398 565 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ATP6AP2O75787 350 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 BAIAP3O94812 1187 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 HPRP00739 348 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 GNRH1P01148 92 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ASLP04424 464 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 HMBSP08397 361 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 CDH1P12830 882 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 CDH2P19022 906 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 JAK1P23458 1154 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 MC4RP32245 332 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 RFC2P35250 354 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ALDH3B2P48448 385 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 SCNN1BP51168 640 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 POLR2JP52435 117 aaKnown RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 CDH13P55290 713 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 RAB15P59190 212 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 CDKL1Q00532 357 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 TIAL1Q01085 375 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 PRKCQQ04759 706 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 TSNQ15631 228 aaKnown RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 VPS26BQ4G0F5 336 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 NHSL2Q5HYW2 709 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ADGRF1Q5T601 910 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 SDHAF4Q5VUM1 108 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 TPGS2Q68CL5 300 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 SLC8B1Q6J4K2 584 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 IYDQ6PHW0 289 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 TTC33Q6PID6 262 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ABRAXAS1Q6UWZ7 409 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 LAYNQ6UX15 382 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 SPRED1Q7Z699 444 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 LDB1Q86U70 411 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 ZFAND4Q86XD8 727 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 HID1Q8IV36 788 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 RBFAQ8N0V3 343 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 MYO1HQ8N1T3 1032 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 HJURPQ8NCD3 748 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-202ENST00000459727 PDPRQ8NCN5 879 aa8.76□□□□□ -1.01
HDAC3-202ENST00000459727 FAM156AQ8NDB6 213 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms