RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ZNF473Q8WTR7 871 aaKnown RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 SORCS1Q8WY21 1168 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 DNASE1L2Q92874 299 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 ZNF317Q96PQ6 595 aaPredicted RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 CCT8L2Q96SF2 557 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 NELL2Q99435 816 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 FAM107BQ9H098 131 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 C8orf33Q9H7E9 229 aaPredicted RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 MANSC1Q9H8J5 431 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 SYTL2Q9HCH5 934 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TRPV5Q9NQA5 729 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 TAS2R13Q9NYV9 303 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 SLC17A7Q9P2U7 560 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 THAP10Q9P2Z0 257 aaPredicted RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 NFKBIL1Q9UBC1 381 aaPredicted RBP8.89□□□□□ -0.99
VPS50-207ENST00000458530 CRLS1Q9UJA2 301 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 VWA7Q9Y334 891 aa8.89□□□□□ -0.99
VPS50-207ENST00000458530 LRRK1Q38SD2 2015 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 OR51F1A6NGY5 319 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 NPIPB15A6NHN6 443 aaPredicted RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 PRRT4C9JH25 899 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 E5RI56 91 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 KPNA3O00505 521 aaPredicted RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 CCL22O00626 93 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 AURKAO14965 403 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 TRIM24O15164 1050 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 PLIN3O60664 434 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 RHOBTB1O94844 696 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 SNUPNO95149 360 aaKnown RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 KLHL2O95198 593 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 IL1BP01584 269 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 PROCP04070 461 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 RETP07949 1114 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 RBP1P09455 135 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 LTA4HP09960 611 aaKnown RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 SLC35E2BP0CK96 405 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 MYL2P10916 166 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 HNRNPLP14866 589 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS50-207ENST00000458530 TAC1P20366 129 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 CD9P21926 228 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 FDXRP22570 491 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 RPS3P23396 243 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS50-207ENST00000458530 GRK2P25098 689 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 GABRB3P28472 473 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 GKP32189 559 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 SKIV2L2P42285 1042 aaKnown RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 SLC6A11P48066 632 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 DCDC1P59894 354 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 PFKPQ01813 784 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 COL9A2Q14055 689 aaPredicted RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 ITIH4Q14624 930 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 LRRC66Q68CR7 880 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 LAIR1Q6GTX8 287 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 SDE2Q6IQ49 451 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 CNSTQ6PJW8 725 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 CRTC1Q6UUV9 634 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 FAM151BQ6UXP7 276 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 DPPA4Q7L190 304 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 LRRC34Q8IZ02 419 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 DTX3LQ8TDB6 740 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 HEXDCQ8WVB3 486 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 LPGAT1Q92604 370 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 ZNF75CPQ92670 426 aaPredicted RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 RAB7BQ96AH8 199 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 CCDC126Q96EE4 140 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 SCYL1Q96KG9 808 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 OMDQ99983 421 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 P2RY13Q9BPV8 354 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 AARSD1Q9BTE6 412 aaKnown RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 TSSK1BQ9BXA7 367 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 PITPNM3Q9BZ71 974 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 PLA2G2FQ9BZM2 168 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 CLPBQ9H078 707 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 TMEM245Q9H330 911 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 SUDS3Q9H7L9 328 aaPredicted RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 NMRAL1Q9HBL8 299 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 GPAMQ9HCL2 828 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 BPIFA1Q9NP55 256 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 KCTD5Q9NXV2 234 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 GTSE1Q9NYZ3 720 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 MARCH4Q9P2E8 410 aaPredicted RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 B4GALT6Q9UBX8 382 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 GNPTGQ9UJJ9 305 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 RALYQ9UKM9 306 aaKnown RBP8.88□□□□□ -0.99
VPS50-207ENST00000458530 STARD13Q9Y3M8 1113 aa8.88□□□□□ -0.99
VPS50-207ENST00000458530 OTOL1A6NHN0 477 aaPredicted RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 C16orf96A6NNT2 1141 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ARNTLO00327 626 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 QSOX1O00391 747 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 EBAG9O00559 213 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 PRMT5O14744 637 aaPredicted RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 PHGDHO43175 533 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 SYNCRIPO60506 623 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 CLDN7O95471 211 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 EPHX1P07099 455 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 BPGMP07738 259 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ELFN1P0C7U0 828 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 RALBP11234 206 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 PKMP14618 531 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms