RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 ARL5CA6NH57 179 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 C12orf71A8MTZ7 269 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 H3BNH8 94 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 NDUFS8O00217 210 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 KLHL18O94889 574 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 BPNT1O95861 308 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 PTTG1O95997 202 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 DHFRP00374 187 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 GSNP06396 782 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 YES1P07947 543 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ITIH2P19823 946 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ABCB4P21439 1286 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 MMP8P22894 467 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 PIK3R1P27986 724 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ATP6V1E1P36543 226 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 HPCAL1P37235 193 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 CASP3P42574 277 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 PCP4P48539 62 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TAF6P49848 677 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 CDH8P55286 799 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 C1QTNF8P60827 252 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 CLN3Q13286 438 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 BFSP2Q13515 415 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 AANATQ16613 207 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 SOWAHAQ2M3V2 549 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TYSND1Q2T9J0 566 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 SV2CQ496J9 727 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ATG16L1Q676U5 607 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 SLC9A4Q6AI14 798 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ZFP1Q6P2D0 407 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 FBXO46Q6PJ61 603 aaPredicted RBP6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 RIPOR1Q6ZS17 1223 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 SLC16A12Q6ZSM3 486 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 KIAA0408Q6ZU52 694 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 LRRC8DQ7L1W4 858 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 LYSMD3Q7Z3D4 306 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 CTU1Q7Z7A3 348 aaKnown RBP6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 SLC9B2Q86UD5 537 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 RTN4RL1Q86UN2 441 aaPredicted RBP6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 NT5DC3Q86UY8 548 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 RETREG3Q86VR2 466 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 C12orf40Q86WS4 652 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 SYCE1Q8N0S2 351 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 CLEC4FQ8N1N0 589 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 RASGEF1CQ8N431 466 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 WDTC1Q8N5D0 677 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TOP6BLQ8N6T0 577 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ATP2A3Q93084 1043 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ALKBH8Q96BT7 664 aaKnown RBP6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TMEM176AQ96HP8 235 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 FRMD6Q96NE9 622 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 GAD1Q99259 594 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 ADAM2Q99965 735 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TMEM246Q9BRR3 403 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 FTHL17Q9BXU8 183 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 DCLK3Q9C098 648 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 RNF208Q9H0X6 261 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 RSAD1Q9HA92 442 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 PPCSQ9HAB8 311 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 RPRD1BQ9NQG5 326 aaKnown RBP6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 SMOXQ9NWM0 555 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 HPF1Q9NWY4 346 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 MIOSQ9NXC5 875 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TOR4AQ9NXH8 423 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TXNDC16Q9P2K2 825 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 CPNE7Q9UBL6 633 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 TRMT6Q9UJA5 497 aaKnown RBP6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 PLA2G4CQ9UP65 541 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 MYRFQ9Y2G1 1151 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 PCDHGA2Q9Y5H1 932 aa6.8□□□□□ -1.32
CUBNP3-201ENST00000457461 PATJQ8NI35 1801 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 VWA8A3KMH1 1905 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 LEUTXA8MZ59 168 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 KPNA7A9QM74 516 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 PRPF4O43172 522 aaKnown RBP eCLIP6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 MED7O43513 233 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 HS6ST1O60243 411 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 FZD6O60353 706 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 NBNO60934 754 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 NOL3O60936 208 aaKnown RBP6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 NADKO95544 446 aaPredicted RBP6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 EOMESO95936 686 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 PLGP00747 810 aaPredicted RBP6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 CXCL10P02778 98 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 OPN1MWP04001 364 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 JUNP05412 331 aaKnown RBP6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 RB1P06400 928 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 THP07101 528 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 HOXD4P09016 255 aaPredicted RBP6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 HBQ1P09105 142 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 OPN1MW2P0DN77 364 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 OPN1MW3P0DN78 364 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 KRT15P19012 456 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 CD40LGP29965 261 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 L1CAMP32004 1257 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 NSFP46459 744 aaKnown RBP6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 MAN2A2P49641 1150 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 RAB13P51153 203 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 TPMTP51580 245 aa6.79□□□□□ -1.32
CUBNP3-201ENST00000457461 AFF1P51825 1210 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms