RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ETNK1Q9HBU6 452 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 RAB6BQ9NRW1 208 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 KLC4Q9NSK0 619 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 PAK5Q9P286 719 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 RABGEF1Q9UJ41 708 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 DRG1Q9Y295 367 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 KCTD3Q9Y597 815 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 PCDHB1Q9Y5F3 818 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 ST14Q9Y5Y6 855 aa17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 ARHGEF17Q96PE2 2063 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-215ENST00000456545 ERI2A8K979 691 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 TMX2-CTNND1H3BSU7 103 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 PRAMEF1O95521 474 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 MSH3P20585 1137 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 RP1P56715 2156 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 PLA2G4EQ3MJ16 856 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 AMZ1Q400G9 498 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 KCTD11Q693B1 232 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 DENND5AQ6IQ26 1287 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 TRAPPC5Q8IUR0 188 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 PATE1Q8WXA2 126 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 PBKQ96KB5 322 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 ASXL3Q9C0F0 2248 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 ZMYND15Q9H091 742 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 FKBPLQ9UIM3 349 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 CRLS1Q9UJA2 301 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 DNAJC16Q9Y2G8 782 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 PCYT1BQ9Y5K3 369 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 SLC30A1Q9Y6M5 507 aa17.85■□□□□ 0.45
PDLIM2-215ENST00000456545 CHUKO15111 745 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 SRP72O76094 671 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 ETS1P14921 441 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 ZNF7P17097 686 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 POU6F1Q14863 301 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 RTP5Q14D33 572 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 FOXR1Q6PIV2 292 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 C4orf22Q6V702 233 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 REXO1L1PQ8IX06 675 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 KLHDC8BQ8IXV7 354 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 OR13C4Q8NGS5 318 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 DCUN1D1Q96GG9 259 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 TMEM74Q96NL1 305 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 SLC38A3Q99624 504 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 STRADBQ9C0K7 418 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 PIH1D1Q9NWS0 290 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 TBC1D29Q9UFV1 150 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 TMPRSS11EQ9UL52 423 aa17.84■□□□□ 0.45
PDLIM2-215ENST00000456545 SCN8AQ9UQD0 1980 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 OR5K4A6NMS3 321 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 NTN3O00634 580 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 RALBP11234 206 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 ITGALP20701 1170 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 OR1D5P58170 312 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 GABREP78334 506 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 CDH17Q12864 832 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 SIX1Q15475 284 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 MAP9Q49MG5 647 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 GPRC6AQ5T6X5 926 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 DRICH1Q6PGQ1 229 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 TMEM220Q6QAJ8 160 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 SPRED1Q7Z699 444 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 PRUNE1Q86TP1 453 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 SLC9B2Q86UD5 537 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 PIM3Q86V86 326 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 C17orf82Q86X59 251 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 PROSER1Q86XN7 944 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 LSMEM2Q8N112 164 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 SLC35F6Q8N357 371 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 OR52K1Q8NGK4 314 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 SH3KBP1Q96B97 665 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 ULK4Q96C45 1275 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 ATXN7L3BQ96GX2 97 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 AHCYL2Q96HN2 611 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 NAP1L3Q99457 506 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 KCNF1Q9H3M0 494 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 EPB41L5Q9HCM4 733 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 KCNK4Q9NYG8 393 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 ATXN7L1Q9ULK2 861 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 ENTPD2Q9Y5L3 495 aa17.83■□□□□ 0.44
PDLIM2-215ENST00000456545 ZFC3H1O60293 1989 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 A0A1W2PQM1 296 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 PDZK1P1A8MUH7 402 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 PPM1DO15297 605 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 MPOP05164 745 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 APRTP07741 180 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 ZSCAN5DPP0CG00 497 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 F3P13726 295 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 IDSP22304 550 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 RBMS1P29558 406 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 RPL22P35268 128 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 GPR3P46089 330 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 KCNJ1P48048 391 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 CLCNKAP51800 687 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 INHBCP55103 352 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 B4GALNT1Q00973 533 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 HHEXQ03014 270 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 LAMB3Q13751 1172 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 SKIDA1Q1XH10 827 aa17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 KHDC1Q4VXA5 237 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-215ENST00000456545 ZRANB3Q5FWF4 1079 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms