RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 RICTORQ6R327 1708 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-207ENST00000453963 PGRMC2O15173 223 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 KLHL18O94889 574 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 LIN54Q6MZP7 749 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-207ENST00000453963 ANKRD23Q86SG2 305 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 PIK3C3Q8NEB9 887 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 NIFKQ9BYG3 293 aaKnown RBP11.96□□□□□ -0.49
SEC16A-207ENST00000453963 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 NPEPPSL1A6NEC2 478 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 FABP3P05413 133 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 BMP7P18075 431 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 NRG1Q02297 640 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-207ENST00000453963 TUSC3Q13454 348 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 MON1AQ86VX9 555 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 PIK3R3Q92569 461 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 TSSK3Q96PN8 268 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 COPS8Q99627 209 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 IGFLR1Q9H665 355 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 AGO3Q9H9G7 860 aaKnown RBP11.96□□□□□ -0.49
SEC16A-207ENST00000453963 COMMD9Q9P000 198 aa11.96□□□□□ -0.49
SEC16A-207ENST00000453963 CCDC59Q9P031 241 aaKnown RBP11.96□□□□□ -0.49
SEC16A-207ENST00000453963 TRAV19A0A0A6YYK7 116 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 CASKO14936 926 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 PRKAG1P54619 331 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 SLC18A2Q05940 514 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 DDI2Q5TDH0 399 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 UTS2BQ765I0 119 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 CACUL1Q86Y37 369 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 TCAIMQ8N3R3 496 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 FIBCD1Q8N539 461 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 STYXQ8WUJ0 223 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 KLHL5Q96PQ7 755 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 ASAH2Q9NR71 780 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 STOML2Q9UJZ1 356 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 ZNF490Q9ULM2 529 aaPredicted RBP11.96□□□□□ -0.5
SEC16A-207ENST00000453963 RBMX2Q9Y388 322 aaKnown RBP11.96□□□□□ -0.5
SEC16A-207ENST00000453963 TELO2Q9Y4R8 837 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 COL1A2P08123 1366 aa11.96□□□□□ -0.5
SEC16A-207ENST00000453963 MT-ND1P03886 318 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 L1CAMP32004 1257 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 PPM1AP35813 382 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 ZNHIT3Q15649 155 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 SLC9B1Q4ZJI4 515 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 CPTPQ5TA50 214 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 AHSA2Q719I0 299 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 CPNE8Q86YQ8 564 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 HEXDCQ8WVB3 486 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 FCGR1BQ92637 280 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 C1GALT1C1Q96EU7 318 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 AHCYL2Q96HN2 611 aaKnown RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 M0R2N6 131 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 USP2O75604 605 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 ADH1AP07327 375 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 RAP2AP10114 183 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 SDC2P34741 201 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 PFKPQ01813 784 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 CMASQ8NFW8 434 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 GRPEL2Q8TAA5 225 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 CXorf40AQ8TE69 158 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 SLC25A51Q9H1U9 297 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 NUDT4Q9NZJ9 180 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 MRPS23Q9Y3D9 190 aaKnown RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 GSAPA4D1B5 854 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 MPZL2O60487 215 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 CTSEP14091 401 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 TMEM214Q6NUQ4 689 aaKnown RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 PDSS2Q86YH6 399 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 RELL1Q8IUW5 271 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 GPR156Q8NFN8 814 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 CLP1Q92989 425 aaKnown RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 DEFB118Q96PH6 123 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 SLC9A7Q96T83 725 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 TM6SF2Q9BZW4 377 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 MAF1Q9H063 256 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 SP140LQ9H930 580 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 TMPRSS4Q9NRS4 437 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 INTS10Q9NVR2 710 aaKnown RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 DNAJB9Q9UBS3 223 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 ZNF99A8MXY4 864 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 SCAMP3O14828 347 aaKnown RBP11.95□□□□□ -0.5
SEC16A-207ENST00000453963 NDST3O95803 873 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 TCF4P15884 667 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 NR4A1P22736 598 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 NMBRP28336 390 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 TAS2R39P59534 338 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 ADAM17P78536 824 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 HKDC1Q2TB90 917 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 TNFAIP8L3Q5GJ75 292 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 SMYD1Q8NB12 490 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 GRIN3AQ8TCU5 1115 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 TMCO6Q96DC7 493 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 S100A13Q99584 98 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 OXSMQ9NWU1 459 aa11.95□□□□□ -0.5
SEC16A-207ENST00000453963 LRRC14BA6NHZ5 514 aa11.94□□□□□ -0.5
SEC16A-207ENST00000453963 C1QTNF3-AMACRE9PGA6 284 aa11.94□□□□□ -0.5
SEC16A-207ENST00000453963 METTL18O95568 372 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms