RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SOAT1P35610 550 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 SOX6P35712 828 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 CD97P48960 835 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 ARSFP54793 590 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 TP53BP2Q13625 1128 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 NIPAL1Q6NVV3 410 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 CAMKK1Q8N5S9 505 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 OR4K2Q8NGD2 314 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 OR9Q1Q8NGQ5 310 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 TFAP2CQ92754 450 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 LINGO1Q96FE5 620 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 OLFM1Q99784 485 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 ELOVL6Q9H5J4 265 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 AGO3Q9H9G7 860 aaKnown RBP12.31□□□□□ -0.44
UBE3B-204ENST00000449510 PDP1Q9P0J1 537 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-204ENST00000449510 DUSP12Q9UNI6 340 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 IPPQ9Y573 584 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 CDC7O00311 574 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 IL1BP01584 269 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 IL2P60568 153 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 RPS3AP61247 264 aaKnown RBP12.31□□□□□ -0.44
UBE3B-204ENST00000449510 TRAP1Q12931 704 aaKnown RBP12.31□□□□□ -0.44
UBE3B-204ENST00000449510 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 DGKKQ5KSL6 1271 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 TAC4Q86UU9 113 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 ZNF597Q96LX8 424 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 CORINQ9Y5Q5 1042 aa12.31□□□□□ -0.44
UBE3B-204ENST00000449510 UPK3BL1B0FP48 263 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 HNRNPCL2B2RXH8 293 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 UPK3BL2E5RIL1 263 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 LZTS3O60299 673 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 NPHS1O60500 1241 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 TSPAN1O60635 241 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 CNTN5O94779 1100 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 PRSS56P0CW18 603 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 RXRBP28702 533 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 OR1G1P47890 313 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 PRIM2P49643 509 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 RAB25P57735 213 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 MRPL28Q13084 256 aaKnown RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 ARMCX4Q5H9R4 360 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 SPOUT1Q5T280 376 aaKnown RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 STXBP5Q5T5C0 1151 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 TIGD7Q6NT04 549 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 ZFP90Q8TF47 636 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 NCSTNQ92542 709 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 PRDM5Q9NQX1 630 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 CCM2LQ9NUG4 571 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 C14orf119Q9NWQ9 140 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 GNPTGQ9UJJ9 305 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 KLHL20Q9Y2M5 609 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 DNMT3AQ9Y6K1 912 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 COL4A1P02462 1669 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 TCRBV5S1A1TA0A578 114 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 AIREO43918 545 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 MSH3P20585 1137 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 GLUD2P49448 558 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 CLDN10P78369 228 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 BEX3Q00994 111 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 CDK18Q07002 472 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 TYW3Q6IPR3 259 aaKnown RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 NEK10Q6ZWH5 1172 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 TMEM135Q86UB9 458 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 RETREG3Q86VR2 466 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 PCED1BQ96HM7 432 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 KRT84Q9NSB2 600 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 MKS1Q9NXB0 559 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 SYNPO2Q9UMS6 1093 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 KRT87PA6NCN2 255 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 ZNF99A8MXY4 864 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 HLA-DQB2P05538 268 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 XPAP23025 273 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-204ENST00000449510 GDF5P43026 501 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 HSPA7P48741 367 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 LILRA4P59901 499 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 SH3BP2P78314 561 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 PHC1P78364 1004 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 ZFP69Q49AA0 526 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 NHSL2Q5HYW2 709 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 AQP12AQ8IXF9 295 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 FRS2Q8WU20 508 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 S100ZQ8WXG8 99 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 REEP1Q9H902 201 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 NANOGQ9H9S0 305 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 SMPD4Q9NXE4 827 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 ECM29Q5VYK3 1845 aa12.3□□□□□ -0.44
UBE3B-204ENST00000449510 A0A0U1RQS6 177 aa12.29□□□□□ -0.44
UBE3B-204ENST00000449510 EFCAB9A8MZ26 197 aa12.29□□□□□ -0.44
UBE3B-204ENST00000449510 BMP10O95393 424 aa12.29□□□□□ -0.44
UBE3B-204ENST00000449510 PLA2G16P53816 162 aa12.29□□□□□ -0.44
UBE3B-204ENST00000449510 SLC10A7Q0GE19 358 aa12.29□□□□□ -0.44
UBE3B-204ENST00000449510 PSMD5Q16401 504 aa12.29□□□□□ -0.44
UBE3B-204ENST00000449510 ZC3H12BQ5HYM0 836 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms