RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RIOX2Q8IUF8 465 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 TOMM5Q8N4H5 51 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 BPIFB1Q8TDL5 484 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 PPA2Q9H2U2 334 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 NXF3Q9H4D5 531 aaKnown RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 DNMT3LQ9UJW3 386 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 NAALADL1Q9UQQ1 740 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 USP20Q9Y2K6 914 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 RENP00797 406 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ITGB1P05556 798 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 CYP21A2P08686 494 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ART1P52961 327 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ST3GAL1Q11201 340 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 RDH11Q8TC12 318 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 LRRC46Q96FV0 321 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 BHLHE40O14503 412 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 AHSA1O95433 338 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 GCP02774 474 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 PRKCHP24723 683 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 UQCRC1P31930 480 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 MAGEA11P43364 429 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 BNIP1Q12981 228 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 C6orf52Q5T4I8 152 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 FMR1NBQ8N0W7 255 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 FAM47BQ8NA70 645 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ADCY4Q8NFM4 1077 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 OR7G1Q8NGA0 311 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 CCDC120Q96HB5 630 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 AGAP2Q99490 1192 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ADAM7Q9H2U9 754 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 PLXNC1O60486 1568 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 EFCAB9A8MZ26 197 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 CBX4O00257 560 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 RIPK2O43353 540 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 USP4Q13107 963 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 GNASQ5JWF2 1037 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 C6orf183Q5T699 404 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF470Q6ECI4 717 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF627Q7L945 461 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 VANGL1Q8TAA9 524 aaPredicted RBP8.89□□□□□ -0.99
NIPBL-202ENST00000448238 PSKH2Q96QS6 385 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 BTBD2Q9BX70 525 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 COPS7AQ9UBW8 275 aa8.89□□□□□ -0.99
NIPBL-202ENST00000448238 FAM230AA0A1W2PPH8 454 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 KERAO60938 352 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ZBTB11O95625 1053 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 BCL2L1Q07817 233 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 PCK2Q16822 640 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 FAM122CQ6P4D5 195 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SH3RF1Q7Z6J0 888 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 MCOLN2Q8IZK6 566 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 COLGALT1Q8NBJ5 622 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 METTL21AQ8WXB1 218 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ARL5BQ96KC2 179 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 FAM86C1Q9NVL1 165 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 LRFN1Q9P244 771 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ZMAT5Q9UDW3 170 aaKnown RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 NOS1P29475 1434 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 UNC5CO95185 931 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 PIGRP01833 764 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 RIDAP52758 137 aaKnown RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 GPSM2P81274 684 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ELAVL2Q12926 359 aaKnown RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SLC44A1Q8WWI5 657 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 CXorf40BQ96DE9 158 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 LURAP1Q96LR2 239 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SPOCK3Q9BQ16 436 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ALDH8A1Q9H2A2 487 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-202ENST00000448238 C13orf42A0A1B0GVH6 325 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 E9PAM4 449 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 MTX3Q5HYI7 312 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 C3P1Q6ZMU1 363 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 TNS4Q8IZW8 715 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SLC38A4Q969I6 547 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 CGRRF1Q99675 332 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ADGRE2Q9UHX3 823 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 PCDHGA6Q9Y5G7 932 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ITPK1Q13572 414 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SCGB2B2Q4G0G5 96 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 KRBOX4Q5JUW0 171 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 IDNKQ5T6J7 187 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 FBXL19Q6PCT2 694 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF619Q8N2I2 560 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SVOPLQ8N434 492 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF366Q8N895 744 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SNAPC3Q92966 411 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 C3orf49Q96BT1 292 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 MYRFLQ96LU7 910 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 VPS25Q9BRG1 176 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 SLC19A2O60779 497 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 JCHAINP01591 159 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 CDK2P24941 298 aa8.88□□□□□ -0.99
NIPBL-202ENST00000448238 DYNLL1P63167 89 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms