RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ISOC1Q96CN7 298 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 THAP11Q96EK4 314 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 FEM1CQ96JP0 617 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 MYRFLQ96LU7 910 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 PPM1MQ96MI6 270 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 FBXO44Q9H4M3 255 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 ABCD2Q9UBJ2 740 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SCML2Q9UQR0 700 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 A0A1W2PP18 115 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 NIPSNAP2O75323 286 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 OR4F21O95013 312 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 LDLRP01130 860 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 TUBA4AP68366 448 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 MYBPC3Q14896 1274 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 FXNQ16595 210 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 LCN8Q6JVE9 175 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 GLT6D1Q7Z4J2 308 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SIDT2Q8NBJ9 832 aaKnown RBP12.81□□□□□ -0.36
SHC1-210ENST00000448116 SLC30A3Q99726 388 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 HACD3Q9P035 362 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 EIF2B4Q9UI10 523 aaKnown RBP12.81□□□□□ -0.36
SHC1-210ENST00000448116 GPR45Q9Y5Y3 372 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 NYNRINQ9P2P1 1898 aaKnown RBP12.8□□□□□ -0.36
SHC1-210ENST00000448116 ZNF236Q9UL36 1845 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 OR1I1O60431 355 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 KERAO60938 352 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 ZNF623O75123 536 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 BMP10O95393 424 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 KCNQ1P51787 676 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 CREB5Q02930 508 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 DMPKQ09013 629 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 ZRANB3Q5FWF4 1079 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 TMTC4Q5T4D3 741 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 INTS11Q5TA45 600 aaKnown RBP12.8□□□□□ -0.36
SHC1-210ENST00000448116 SLC2A7Q6PXP3 512 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 SERINC5Q86VE9 423 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 ZNF683Q8IZ20 524 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 TNIP2Q8NFZ5 429 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 KIAA1191Q96A73 305 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 PCDHA9Q9Y5H5 950 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 KATNA1O75449 491 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 MYF6P23409 242 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 RPS9P46781 194 aaKnown RBP12.8□□□□□ -0.36
SHC1-210ENST00000448116 CCT8P50990 548 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 PMS2P3Q13401 168 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 ZBED5Q49AG3 693 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 KLHL35Q6PF15 583 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 MFSD2AQ8NA29 543 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 SLC43A3Q8NBI5 491 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 SEPT8Q92599 483 aa12.8□□□□□ -0.36
SHC1-210ENST00000448116 TDRKHQ9Y2W6 561 aaKnown RBP12.8□□□□□ -0.36
SHC1-210ENST00000448116 OAS3Q9Y6K5 1087 aaKnown RBP12.8□□□□□ -0.36
SHC1-210ENST00000448116 C1RP00736 705 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 HOXC8P31273 242 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
SHC1-210ENST00000448116 EMP3P54852 163 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 NUP107P57740 925 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 ATP6AP1Q15904 470 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 GLB1LQ6UWU2 654 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 TMEM26Q6ZUK4 368 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 TAS2R42Q7RTR8 314 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 TEX26Q8N6G2 289 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 LPCAT1Q8NF37 534 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 RHEBL1Q8TAI7 183 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 BIRC7Q96CA5 298 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 CHID1Q9BWS9 393 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 SPC25Q9HBM1 224 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 SMPD3Q9NY59 655 aaPredicted RBP12.79□□□□□ -0.36
SHC1-210ENST00000448116 PCDHGC4Q9Y5F7 938 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 IQCF5A8MTL0 148 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 FAM155AB1AL88 458 aaPredicted RBP12.79□□□□□ -0.36
SHC1-210ENST00000448116 NDST3O95803 873 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 HNRNPCP07910 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHC1-210ENST00000448116 NFKBIAP25963 317 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 OR4D2P58180 307 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 CTBSQ01459 385 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 KCTD21Q4G0X4 260 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 NANOGP8Q6NSW7 305 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 ABRAXAS1Q6UWZ7 409 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 KIAA2013Q8IYS2 634 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 PACRGLQ8N7B6 248 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 PAF1Q8N7H5 531 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 PDZD8Q8NEN9 1154 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 TRPV1Q8NER1 839 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 GIPC2Q8TF65 315 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 NAA50Q9GZZ1 169 aaKnown RBP12.79□□□□□ -0.36
SHC1-210ENST00000448116 PAIP1Q9H074 479 aaKnown RBP12.79□□□□□ -0.36
SHC1-210ENST00000448116 NANOGQ9H9S0 305 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 PKD2L2Q9NZM6 624 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 EVLQ9UI08 416 aaPredicted RBP12.79□□□□□ -0.36
SHC1-210ENST00000448116 TRMT6Q9UJA5 497 aaKnown RBP12.79□□□□□ -0.36
SHC1-210ENST00000448116 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 ASB1Q9Y576 335 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 PCDHB5Q9Y5E4 795 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 A0A1W2PPW3 197 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 ASPDHA6ND91 283 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 E5RI56 91 aa12.79□□□□□ -0.36
SHC1-210ENST00000448116 B4GAT1O43505 415 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms