RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PSMD3O43242 534 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 CRTAMO95727 393 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 TERF1P54274 439 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 CCL7P80098 99 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 XIAPP98170 497 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 SEMA5AQ13591 1074 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 LRP8Q14114 963 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 TRIP13Q15645 432 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-204ENST00000446876 CCDC38Q502W7 563 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 GPRC6AQ5T6X5 926 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 ZDHHC20Q5W0Z9 365 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 PPP1R21Q6ZMI0 780 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 ZNF547Q8IVP9 402 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 DCBLD1Q8N8Z6 715 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 CCDC97Q96F63 343 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-204ENST00000446876 FAM96AQ9H5X1 160 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 RMI1Q9H9A7 625 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 SLC23A2Q9UGH3 650 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 FEZ2Q9UHY8 353 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-204ENST00000446876 BPTFQ12830 3046 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 UNC13CQ8NB66 2214 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 TRABD2BA6NFA1 517 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 CHUKO15111 745 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 SNX2O60749 519 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 PPFIA2O75334 1257 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 CSO75390 466 aaKnown RBP14.64□□□□□ -0.07
HDAC4-204ENST00000446876 SRP72O76094 671 aaKnown RBP14.64□□□□□ -0.07
HDAC4-204ENST00000446876 CDK14O94921 469 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 RPLP0P05388 317 aaKnown RBP14.64□□□□□ -0.07
HDAC4-204ENST00000446876 APRTP07741 180 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 PRSS56P0CW18 603 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 CTSCP53634 463 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 TMEM115Q12893 351 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-204ENST00000446876 PEX6Q13608 980 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 ITGA9Q13797 1035 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 INSCQ1MX18 579 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 LRRTM4Q86VH4 590 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 C17orf82Q86X59 251 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-204ENST00000446876 ARL14Q8N4G2 192 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 RASGEF1AQ8N9B8 481 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 DNAAF3Q8N9W5 541 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 DDHD1Q8NEL9 900 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 MDM1Q8TC05 714 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 ZNF398Q8TD17 642 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 DTX3LQ8TDB6 740 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 OSGEPL1Q9H4B0 414 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 ASB8Q9H765 288 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 KLC4Q9NSK0 619 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 LRIT1Q9P2V4 623 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 TBC1D29Q9UFV1 150 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 SNX12Q9UMY4 172 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 DNAJC16Q9Y2G8 782 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC4-204ENST00000446876 IGF2RP11717 2491 aa14.64□□□□□ -0.07
HDAC4-204ENST00000446876 ASPMQ8IZT6 3477 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 A0A1W2PQM1 296 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 ERI2A8K979 691 aaKnown RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 PGRMC1O00264 195 aaKnown RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 VEGFDO43915 354 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 SUN1O94901 812 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 PROS1P07225 676 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 GLB1P16278 677 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 MSNP26038 577 aaKnown RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 AKT1P31749 480 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 MC4RP32245 332 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 VPS41P49754 854 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 CDKN1CP49918 316 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 PDX1P52945 283 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 BASP1P80723 227 aaKnown RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 CCDC173Q0VFZ6 552 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 CDH17Q12864 832 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 GTF2H3Q13889 308 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 LDLRAP1Q5SW96 308 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 DET1Q7L5Y6 550 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 SPRED1Q7Z699 444 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 LINC00523Q86TU6 105 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 ZNF761Q86XN6 746 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 TRAPPC5Q8IUR0 188 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 CCNJLQ8IV13 435 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 C17orf53Q8N3J3 647 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 SLC37A2Q8TED4 501 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 ZCCHC14Q8WYQ9 949 aaKnown RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 MAGOHBQ96A72 148 aaKnown RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 DEPDC7Q96QD5 511 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 PRDM8Q9NQV8 689 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 SMOXQ9NWM0 555 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 CRLS1Q9UJA2 301 aa14.63□□□□□ -0.07
HDAC4-204ENST00000446876 ATXN7L1Q9ULK2 861 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 TTC7AQ9ULT0 858 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-204ENST00000446876 A6NCN8 305 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 OR2AG2A6NM03 316 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 RHPN2P1A8MT19 583 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 GPR89AB7ZAQ6 455 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 NTN3O00634 580 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-204ENST00000446876 KMOO15229 486 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 PPM1DO15297 605 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 NUDT21O43809 227 aaKnown RBP14.62□□□□□ -0.07
HDAC4-204ENST00000446876 GPR89BP0CG08 455 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 ZNF7P17097 686 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-204ENST00000446876 PBLDP30039 288 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms