RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ICE2Q659A1 982 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 ADGRG2Q8IZP9 1017 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 CLDN19Q8N6F1 224 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 PCDH20Q8N6Y1 951 aaKnown RBP17.29■□□□□ 0.36
SMC6-206ENST00000446852 CHST14Q8NCH0 376 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 SCRN2Q96FV2 425 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 CEP44Q9C0F1 390 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 MID1IP1Q9NPA3 183 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 APPL1Q9UKG1 709 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 PCDHB1Q9Y5F3 818 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 PRSS21Q9Y6M0 314 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 C2orf16Q68DN1 1984 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 SYCE1LA8MT33 242 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 KLK8O60259 260 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 SORBS2O94875 1100 aaKnown RBP17.29■□□□□ 0.36
SMC6-206ENST00000446852 UGT2B4P06133 528 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 CHRM1P11229 460 aaPredicted RBP17.29■□□□□ 0.36
SMC6-206ENST00000446852 EZRP15311 586 aaKnown RBP17.29■□□□□ 0.36
SMC6-206ENST00000446852 ITGALP20701 1170 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 LHCGRP22888 699 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 ADSLP30566 484 aaPredicted RBP17.29■□□□□ 0.36
SMC6-206ENST00000446852 AGTR2P50052 363 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 RCN1Q15293 331 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 LRRC66Q68CR7 880 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 ELMSAN1Q6PJG2 1045 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 NAT16Q8N8M0 369 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 LEMD2Q8NC56 503 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 GPR26Q8NDV2 337 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 RP9Q8TA86 221 aaKnown RBP17.29■□□□□ 0.36
SMC6-206ENST00000446852 LKAAEAR1Q8TD35 194 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 TRPC4APQ8TEL6 797 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 C3orf30Q96M34 536 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 CPEB1Q9BZB8 566 aaKnown RBP17.29■□□□□ 0.36
SMC6-206ENST00000446852 CLPBQ9H078 707 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 DHRS7Q9Y394 339 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 DNAJC15Q9Y5T4 150 aa17.29■□□□□ 0.36
SMC6-206ENST00000446852 GRXCR1A8MXD5 290 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 PSMG1O95456 288 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 LMNAP02545 664 aaKnown RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 RPS17P08708 135 aaKnown RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 ZNF7P17097 686 aaPredicted RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 RPS3P23396 243 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMC6-206ENST00000446852 ACRV1P26436 265 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 SPAM1P38567 509 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 TRMT5Q32P41 509 aaKnown RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 LRRC73Q5JTD7 316 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 PGM2L1Q6PCE3 622 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 TPRG1Q6ZUI0 275 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 HMGCLL1Q8TB92 370 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 KCNV2Q8TDN2 545 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 ASB2Q96Q27 587 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 KCNA7Q96RP8 456 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 MCCC1Q96RQ3 725 aaPredicted RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 CIPCQ9C0C6 399 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 TBC1D14Q9P2M4 693 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 CDH22Q9UJ99 828 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 PPIL1Q9Y3C6 166 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 ATP6AP2A0A1C7CYW4 349 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 SOBPA7XYQ1 873 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 AIM2O14862 343 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 ATP6AP2O75787 350 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 CIB2O75838 187 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 PDE5AO76074 875 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 ERFP50548 548 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 NUDT2P50583 147 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 ACTR3P61158 418 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 CLCQ05315 142 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 CYLC2Q14093 348 aaPredicted RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 PTRHD1Q6GMV3 140 aaKnown RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 FAM109BQ6ICB4 259 aaPredicted RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 RBFAQ8N0V3 343 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 CLYBLQ8N0X4 340 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 CBARPQ8N350 705 aaPredicted RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 LRRC3BQ96PB8 259 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 SEMA4BQ9NPR2 832 aaPredicted RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 TSR3Q9UJK0 312 aaKnown RBP17.28■□□□□ 0.36
SMC6-206ENST00000446852 PTGDR2Q9Y5Y4 395 aa17.28■□□□□ 0.36
SMC6-206ENST00000446852 POP4O95707 220 aaKnown RBP17.27■□□□□ 0.36
SMC6-206ENST00000446852 FGF4P08620 206 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 ITGB6P18564 788 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 HERC3Q15034 1050 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 C1orf146Q5VVC0 180 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 GRAMD4Q6IC98 578 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 UGT3A1Q6NUS8 523 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 RFLNAQ6ZTI6 216 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 KIRREL3Q8IZU9 778 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 EFCAB3Q8N7B9 438 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 OR2A12Q8NGT7 310 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 ITFG1Q8TB96 612 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 SORCS1Q8WY21 1168 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 RCN3Q96D15 328 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 C19orf60Q96EN9 201 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 TACO1Q9BSH4 297 aaKnown RBP17.27■□□□□ 0.36
SMC6-206ENST00000446852 C1QTNF3Q9BXJ4 246 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 ASB1Q9Y576 335 aa17.27■□□□□ 0.36
SMC6-206ENST00000446852 GOLGA8CPA6NN73 597 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 STX16-NPEPL1H3BU86 382 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 STX16O14662 325 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 CCNT2O60583 730 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms