RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 ECEL1O95672 775 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 SOD1P00441 154 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 ATP1A1P05023 1023 aaKnown RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 LPOP22079 712 aaPredicted RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 AK4P27144 223 aaPredicted RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 ALDH4A1P30038 563 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 GPR3P46089 330 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 LSSP48449 732 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 UCNP55089 124 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 PCBP4P57723 403 aaKnown RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 EIF3IQ13347 325 aaKnown RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 HLTFQ14527 1009 aaKnown RBP eCLIP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 CLPPQ16740 277 aaPredicted RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 INSCQ1MX18 579 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 PARP6Q2NL67 630 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 FOXR1Q6PIV2 292 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 TRIM74Q86UV6 250 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 PIM3Q86V86 326 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 ARL14Q8N4G2 192 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 TRIM58Q8NG06 486 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 CCL4L1Q8NHW4 92 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 WDR36Q8NI36 951 aaKnown RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 DTX3LQ8TDB6 740 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 MED8Q96G25 268 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 AHCYL2Q96HN2 611 aaKnown RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 ZNF578Q96N58 590 aaPredicted RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 DPYSL5Q9BPU6 564 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 OR2AG1Q9H205 316 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 LZTFL1Q9NQ48 299 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 SPATS2LQ9NUQ6 558 aaKnown RBP10.97□□□□□ -0.65
HLA-F-221ENST00000444621 SPTA1P02549 2419 aa10.97□□□□□ -0.65
HLA-F-221ENST00000444621 PIEZO2Q9H5I5 2752 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CCDC187A0A096LP49 1063 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 GLYATL1P3A0A0U1RQE8 302 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 FADS2P1A8MWK0 482 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 E7EVH7 732 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 DDX3YO15523 660 aaKnown RBP10.96□□□□□ -0.65
HLA-F-221ENST00000444621 NOBOXO60393 691 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 SNX2O60749 519 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 KCNJ13O60928 360 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CDK14O94921 469 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 AGTP01019 485 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 RALBP11234 206 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 BPIP17213 487 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 MSNP26038 577 aaKnown RBP10.96□□□□□ -0.65
HLA-F-221ENST00000444621 PSMB4P28070 264 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 HADHAP40939 763 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CSRP3P50461 194 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 INHBCP55103 352 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 GABREP78334 506 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CCL7P80098 99 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 LAMB3Q13751 1172 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 TAF1AQ15573 450 aaPredicted RBP10.96□□□□□ -0.65
HLA-F-221ENST00000444621 LDLRAP1Q5SW96 308 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 AADACL2Q6P093 401 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 ZNF662Q6ZS27 426 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 PRICKLE2Q7Z3G6 844 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 LINC00523Q86TU6 105 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 SLC9B2Q86UD5 537 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 LRRTM4Q86VH4 590 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 NRROSQ86YC3 692 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 FAM71DQ8N9W8 422 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CCDC110Q8TBZ0 833 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 TMEM159Q96B96 161 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CCDC97Q96F63 343 aaPredicted RBP10.96□□□□□ -0.65
HLA-F-221ENST00000444621 OXNAD1Q96HP4 312 aaPredicted RBP10.96□□□□□ -0.65
HLA-F-221ENST00000444621 VPS35Q96QK1 796 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 WDR24Q96S15 920 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 SLC38A3Q99624 504 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 FAM118BQ9BPY3 351 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 TBL1YQ9BQ87 522 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 HERPUD2Q9BSE4 406 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.96□□□□□ -0.65
HLA-F-221ENST00000444621 TRIM4Q9C037 500 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 C10orf88Q9H8K7 445 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 LRRC40Q9H9A6 602 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 EPB41L5Q9HCM4 733 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 THSD1Q9NS62 852 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 ATXN10Q9UBB4 475 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CNOT6Q9ULM6 557 aaKnown RBP10.96□□□□□ -0.65
HLA-F-221ENST00000444621 ZNF148Q9UQR1 794 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 PCDHB1Q9Y5F3 818 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 CAPN6Q9Y6Q1 641 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 RNF215Q9Y6U7 377 aa10.96□□□□□ -0.65
HLA-F-221ENST00000444621 NTN3O00634 580 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-221ENST00000444621 KLK10O43240 276 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 DNAJC6O75061 913 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 CPNE6O95741 557 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 FUCA1P04066 466 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 ACP5P13686 325 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 MSH3P20585 1137 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 MLLT3P42568 568 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-221ENST00000444621 ERVPABLB-1P60509 514 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 VAC14Q08AM6 782 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 TMEM115Q12893 351 aaPredicted RBP10.95□□□□□ -0.66
HLA-F-221ENST00000444621 AMZ1Q400G9 498 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 MAP9Q49MG5 647 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 C3orf38Q5JPI3 329 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 FAM182AQ5T1J6 154 aa10.95□□□□□ -0.66
HLA-F-221ENST00000444621 MEI1Q5TIA1 1274 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms