RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 MAZP56270 477 aaKnown RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 SNX1Q13596 522 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 SPARCL1Q14515 664 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 KIR2DS5Q14953 304 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 OASLQ15646 514 aaKnown RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 CHRNA6Q15825 494 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 LONRF2Q1L5Z9 754 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 FAM151BQ6UXP7 276 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 LRRC69Q6ZNQ3 347 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 GSTA5Q7RTV2 222 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 KLHDC8BQ8IXV7 354 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 DNAAF3Q8N9W5 541 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 WDR36Q8NI36 951 aaKnown RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 STYXQ8WUJ0 223 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 PTCD2Q8WV60 388 aaKnown RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 HEXDCQ8WVB3 486 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 C1orf54Q8WWF1 131 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 TMEM159Q96B96 161 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 RTP4Q96DX8 246 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 AHCYL2Q96HN2 611 aaKnown RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 ZNF514Q96K75 400 aaPredicted RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 PBKQ96KB5 322 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 DPYSL5Q9BPU6 564 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 TIMM29Q9BSF4 260 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 OSGEPL1Q9H4B0 414 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 POLR1BQ9H9Y6 1135 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A7Q9HAW7 530 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A10Q9HAW8 530 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A8Q9HAW9 530 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 ARFGAP3Q9NP61 516 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 KLC4Q9NSK0 619 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 CRLS1Q9UJA2 301 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 KCNK6Q9Y257 313 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 PRKAB1Q9Y478 270 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 JRKLQ9Y4A0 524 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 PLEKHM1Q9Y4G2 1056 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 PCDHB1Q9Y5F3 818 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 ENTPD2Q9Y5L3 495 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 SLC30A1Q9Y6M5 507 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 TPRP12270 2363 aaKnown RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 LAMA1P25391 3075 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 TRBV23OR9-2A0A075B6M9 112 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 A0A1W2PQM1 296 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 KLHL33A6NCF5 533 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 SRRM3A6NNA2 597 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 CFAP99D6REC4 459 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 AP3B1O00203 1094 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 RRP8O43159 456 aaKnown RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 MTX2O75431 263 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 SRP72O76094 671 aaKnown RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 CPNE6O95741 557 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 FGGP02679 453 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 F3P13726 295 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF7P17097 686 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ITGALP20701 1170 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 IDSP22304 550 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 AKT1P31749 480 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 CCKBRP32239 447 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 FASLGP48023 281 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 GDF10P55107 478 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 GABREP78334 506 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 GPLD1P80108 840 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 B4GALNT1Q00973 533 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 HHEXQ03014 270 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 CDH17Q12864 832 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 SKIDA1Q1XH10 827 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 MAP9Q49MG5 647 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 C3orf38Q5JPI3 329 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF648Q5T619 568 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 KCTD11Q693B1 232 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 DRICH1Q6PGQ1 229 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 IYDQ6PHW0 289 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 CRTC3Q6UUV7 619 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 PPP1R21Q6ZMI0 780 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 SPRED1Q7Z699 444 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 TRAPPC5Q8IUR0 188 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 DDHD1Q8NEL9 900 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ATG4AQ8WYN0 398 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 FGF11Q92914 225 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ULK4Q96C45 1275 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 DCUN1D1Q96GG9 259 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF578Q96N58 590 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 NAP1L3Q99457 506 aaPredicted RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 CMKLR1Q99788 373 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 GORASP1Q9BQQ3 440 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 TLR10Q9BXR5 811 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ETNK1Q9HBU6 452 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 SARS2Q9NP81 518 aaKnown RBP10.33□□□□□ -0.76
MCF2L-216ENST00000439475 KCNK4Q9NYG8 393 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 PCDHGA8Q9Y5G5 932 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 ARL5AQ9Y689 179 aa10.33□□□□□ -0.76
MCF2L-216ENST00000439475 PDZK1P1A8MUH7 402 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 D6RAR5 112 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 PPM1DO15297 605 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 B4GAT1O43505 415 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 KIF5CO60282 957 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 BRINP1O60477 761 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 PRAMEF1O95521 474 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms