RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 WDR74Q6RFH5 385 aaPredicted RBP18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 CRTC3Q6UUV7 619 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 SPOCD1Q6ZMY3 1216 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 TRIM48Q8IWZ4 208 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 JPH3Q8WXH2 748 aaPredicted RBP18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 TEKT5Q96M29 485 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 ASPSCR1Q9BZE9 553 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 KLHL8Q9P2G9 620 aaPredicted RBP18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 NFKBIL1Q9UBC1 381 aaPredicted RBP18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 FAM153AQ9UHL3 310 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 PCDHGA3Q9Y5H0 932 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 ALG6Q9Y672 507 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 KMOO15229 486 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 ZRANB2O95218 330 aaKnown RBP eCLIP18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 PLA2G2AP14555 144 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 PECAM1P16284 738 aaPredicted RBP18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 EPHA4P54764 986 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 RAB15P59190 212 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 TBX2Q13207 712 aaPredicted RBP18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 SPA17Q15506 151 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 LRRTM4Q86VH4 590 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 ZC3H18Q86VM9 953 aaKnown RBP18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 DTX1Q86Y01 620 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 IL22RA1Q8N6P7 574 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 GDAP1Q8TB36 358 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 TADA1Q96BN2 335 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 DDA1Q9BW61 102 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 EPB41L1Q9H4G0 881 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 PRDM8Q9NQV8 689 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 CPNE7Q9UBL6 633 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 PCDHGA4Q9Y5G9 962 aa18.22■□□□□ 0.51
AC004540.1-201ENST00000439120 GCN1Q92616 2671 aaKnown RBP18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 A6NCN8 305 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 PDZK1P1A8MUH7 402 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 B4E171 279 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 BPIP17213 487 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 NFKB1P19838 968 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 TSPAN7P41732 249 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 HADHBP55084 474 aaKnown RBP18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 GTF2H3Q13889 308 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 ADGRG6Q86SQ4 1221 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 RCOR2Q8IZ40 523 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 HAUS1Q96CS2 278 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 RBM41Q96IZ5 413 aaKnown RBP18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 TTC25Q96NG3 672 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 PLEKHG4BQ96PX9 1271 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 SEMA4CQ9C0C4 833 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 GOLPH3Q9H4A6 298 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 TRABDQ9H4I3 376 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 BPIFA1Q9NP55 256 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 OCIAD1Q9NX40 245 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 KLHL3Q9UH77 587 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 SPO11Q9Y5K1 396 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 B3GALT1Q9Y5Z6 326 aa18.21■□□□□ 0.51
AC004540.1-201ENST00000439120 VEGFDO43915 354 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 MTX2O75431 263 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 CDK14O94921 469 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 VIPP01282 170 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 ITGB2P05107 769 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 ZNF7P17097 686 aaPredicted RBP18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 VCLP18206 1134 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 CLCNKAP51800 687 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 WNT3AP56704 352 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 SEPT7Q16181 437 aaKnown RBP18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 TAZQ16635 292 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 CCDC181Q5TID7 509 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 PID1Q7Z2X4 250 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 KATNAL2Q8IYT4 538 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 EXTL1Q92935 676 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 PMEPA1Q969W9 287 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 TEFMQ96QE5 360 aaKnown RBP18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 VAT1Q99536 393 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 DNAJC16Q9Y2G8 782 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 ADGRG1Q9Y653 693 aa18.2■□□□□ 0.5
AC004540.1-201ENST00000439120 AHCTF1Q8WYP5 2266 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 LILRA5A6NI73 299 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 F5H423 210 aaPredicted RBP18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 AURKAO14965 403 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 CHUKO15111 745 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 CD68P34810 354 aaPredicted RBP18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 CYLC1P35663 651 aaPredicted RBP18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 WASHC5Q12768 1159 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 SDK2Q58EX2 2172 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 ZDHHC20Q5W0Z9 365 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 ANKS6Q68DC2 871 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 C11orf63Q6NUN7 778 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 SARM1Q6SZW1 724 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 XKR5Q6UX68 686 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 GLT6D1Q7Z4J2 308 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 DAAM2Q86T65 1068 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 PLXDC1Q8IUK5 500 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 TRAPPC5Q8IUR0 188 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 CCDC170Q8IYT3 715 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 CACNA2D3Q8IZS8 1091 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 SLC25A41Q8N5S1 370 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 TC2NQ8N9U0 490 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 HTR3CQ8WXA8 447 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 VPS35Q96QK1 796 aa18.19■□□□□ 0.5
AC004540.1-201ENST00000439120 FERMT1Q9BQL6 677 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms