RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 NLGN3Q9NZ94 848 aa16.73■□□□□ 0.27
TARDBP-203ENST00000439080 PCOLCE2Q9UKZ9 415 aa16.73■□□□□ 0.27
TARDBP-203ENST00000439080 SNX24Q9Y343 169 aa16.73■□□□□ 0.27
TARDBP-203ENST00000439080 CTAGE15A4D2H0 777 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 NEMP2A6NFY4 417 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 AGAP14A8MT82 685 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 GPR89AB7ZAQ6 455 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 LMO7DNF2Z398 122 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 SMAPO00193 183 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 VEGFDO43915 354 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 NUAK1O60285 661 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 GPR89BP0CG08 455 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 CTAGE8P0CG41 777 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 PRSS56P0CW18 603 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 GIMD1P0DJR0 217 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 ALPPL2P10696 532 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 NMBRP28336 390 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 FOXN2P32314 431 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 PRAMEP78395 509 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 CACNG1Q06432 222 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 GTF2H3Q13889 308 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 DEFB133Q30KQ1 61 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 PYCR3Q53H96 274 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 PSAPL1Q6NUJ1 521 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 CRTC3Q6UUV7 619 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 CTAGE6Q86UF2 777 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 CTAGE4Q8IX94 777 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 OR4C6Q8NH72 309 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 CCL4L1Q8NHW4 92 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 BAHD1Q8TBE0 780 aaPredicted RBP16.72■□□□□ 0.27
TARDBP-203ENST00000439080 RHBDD1Q8TEB9 315 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 HDAC10Q969S8 669 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 MFSD3Q96ES6 412 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 TRIM56Q9BRZ2 755 aaKnown RBP16.72■□□□□ 0.27
TARDBP-203ENST00000439080 RAB17Q9H0T7 212 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 TRNAU1APQ9NX07 287 aaKnown RBP16.72■□□□□ 0.27
TARDBP-203ENST00000439080 UTP11Q9Y3A2 253 aaKnown RBP16.72■□□□□ 0.27
TARDBP-203ENST00000439080 PRKAB1Q9Y478 270 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 GPSM3Q9Y4H4 160 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 CSNK1G3Q9Y6M4 447 aa16.72■□□□□ 0.27
TARDBP-203ENST00000439080 ARHGEF17Q96PE2 2063 aaPredicted RBP16.72■□□□□ 0.27
TARDBP-203ENST00000439080 TRBV5-4A0A0C4DH59 114 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 SDR42E2A6NKP2 422 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 NDC80O14777 642 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 TP73O15350 636 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 CBFA2T3O75081 653 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 GOT2P00505 430 aaKnown RBP16.71■□□□□ 0.27
TARDBP-203ENST00000439080 CSRP1P21291 193 aaKnown RBP16.71■□□□□ 0.27
TARDBP-203ENST00000439080 ACRV1P26436 265 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 CDKN1CP49918 316 aaPredicted RBP16.71■□□□□ 0.27
TARDBP-203ENST00000439080 TMEM115Q12893 351 aaPredicted RBP16.71■□□□□ 0.27
TARDBP-203ENST00000439080 ILF3Q12906 894 aaKnown RBP eCLIP16.71■□□□□ 0.276e-6■□□□□ 8.6
TARDBP-203ENST00000439080 PLA2G4EQ3MJ16 856 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 GPR33Q49SQ1 333 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 CES3Q6UWW8 571 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 GKN2Q86XP6 184 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 NOA1Q8NC60 698 aaKnown RBP16.71■□□□□ 0.27
TARDBP-203ENST00000439080 BBOF1Q8ND07 529 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 SLC32A1Q9H598 525 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 FTSJ1Q9UET6 329 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 ZNHIT2Q9UHR6 403 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 DOLKQ9UPQ8 538 aa16.71■□□□□ 0.27
TARDBP-203ENST00000439080 TRIM38O00635 465 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 CHUKO15111 745 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 GRID2O43424 1007 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 ZNF500O60304 480 aaPredicted RBP16.7■□□□□ 0.26
TARDBP-203ENST00000439080 BANF1O75531 89 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 CDK14O94921 469 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 ANXA6P08133 673 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 MSH3P20585 1137 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 AK4P27144 223 aaPredicted RBP16.7■□□□□ 0.26
TARDBP-203ENST00000439080 NOVA1P51513 510 aaKnown RBP16.7■□□□□ 0.26
TARDBP-203ENST00000439080 DHX9Q08211 1270 aaKnown RBP16.7■□□□□ 0.26
TARDBP-203ENST00000439080 CALCOCO2Q13137 446 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 LRP8Q14114 963 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 HIF1AQ16665 826 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 DNAJC21Q5F1R6 531 aaKnown RBP16.7■□□□□ 0.26
TARDBP-203ENST00000439080 FNBP1LQ5T0N5 605 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 DUPD1Q68J44 220 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 TAS2R42Q7RTR8 314 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 TAF8Q7Z7C8 310 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 LRRTM4Q86VH4 590 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 SERPINA9Q86WD7 417 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 TRAPPC5Q8IUR0 188 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 PIANPQ8IYJ0 282 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 CEP112Q8N8E3 955 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 RASGEF1AQ8N9B8 481 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 OR6P1Q8NGX9 317 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 OR4L1Q8NH43 312 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 GPBAR1Q8TDU6 330 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.7■□□□□ 0.267e-6■■■■■ 27.5
TARDBP-203ENST00000439080 ZNF669Q96BR6 464 aaPredicted RBP16.7■□□□□ 0.26
TARDBP-203ENST00000439080 CCDC97Q96F63 343 aaPredicted RBP16.7■□□□□ 0.26
TARDBP-203ENST00000439080 SIGLEC10Q96LC7 697 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 PWWP2AQ96N64 755 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 TTC25Q96NG3 672 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 COPS8Q99627 209 aa16.7■□□□□ 0.26
TARDBP-203ENST00000439080 DUSP23Q9BVJ7 150 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms