RNA–Protein interactions for RNA: ENST00000437048.6

VPS53-204, Transcript of VPS53, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS53, Length 13,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-204ENST00000437048 MBOAT7Q96N66 472 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 XPNPEP3Q9NQH7 507 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 ACTR3BQ9P1U1 418 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 TBC1D14Q9P2M4 693 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 DUXAA6NLW8 204 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 SLITRK5O94991 958 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 OXSR1O95747 527 aaPredicted RBP7.15□□□□□ -1.27
VPS53-204ENST00000437048 ITGA4P13612 1032 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 MLLT6P55198 1093 aaPredicted RBP7.15□□□□□ -1.27
VPS53-204ENST00000437048 USF2Q15853 346 aaPredicted RBP7.15□□□□□ -1.27
VPS53-204ENST00000437048 CYP1B1Q16678 543 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 COL28A1Q2UY09 1125 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 ZNF621Q6ZSS3 439 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 LRRC52Q8N7C0 313 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 RIOX1Q9H6W3 641 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 PPLO60437 1756 aa7.15□□□□□ -1.27
VPS53-204ENST00000437048 EIF2DP41214 584 aaKnown RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 OSTNP61366 133 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 LIPEQ05469 1076 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SMU1Q2TAY7 513 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PIGGQ5H8A4 983 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SPARTQ8N0X7 666 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PURBQ96QR8 312 aaKnown RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 ATXN3LQ9H3M9 355 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 CYP4F12Q9HCS2 524 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 RBM22Q9NW64 420 aaKnown RBP eCLIP7.14□□□□□ -1.27
VPS53-204ENST00000437048 FAM50BQ9Y247 325 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 HSPA12AO43301 675 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 IFI35P80217 286 aaPredicted RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 MPP2Q14168 576 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 CSHL1Q14406 222 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 HS6ST3Q8IZP7 471 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 STOML3Q8TAV4 291 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ZNF606Q8WXB4 792 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SPATA17Q96L03 361 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 TTLL2Q9BWV7 592 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ZNF487B1APH4 448 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ATG12O94817 140 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 RARAP10276 462 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ADH6P28332 368 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ECHS1P30084 290 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 CPTPQ5TA50 214 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SYNE4Q8N205 404 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PARP8Q8N3A8 854 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 WDSUB1Q8N9V3 476 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ZNF514Q96K75 400 aaPredicted RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 CHD4Q14839 1912 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SCGB2A1O75556 95 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 KRT33AO76009 404 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 FGF19O95750 216 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 CCNYL3P0C7X3 344 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 GIT2Q14161 759 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PAOXQ6QHF9 649 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 USP30Q70CQ3 517 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 NXPE2Q96DL1 559 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PNMA5Q96PV4 448 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SYNDIG1LA6NDD5 238 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 E7ENX8 843 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 CSF1RP07333 972 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ERCC1P07992 297 aaPredicted RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 PLK1P53350 603 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 NCS1P62166 190 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 C16orf46Q6P387 395 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SLC2A11Q9BYW1 496 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ABCC13Q9NSE7 274 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 UCKL1Q9NWZ5 548 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 RDH8Q9NYR8 311 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 GJA3Q9Y6H8 435 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ALKQ9UM73 1620 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 FABP12A6NFH5 140 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 FPGTO14772 594 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 TPP1O14773 563 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 FBXO47Q5MNV8 452 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ANKRD22Q5VYY1 191 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 OR51E2Q9H255 320 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 RAVER2Q9HCJ3 691 aaKnown RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 NCKAP1Q9Y2A7 1128 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 TMEM5Q9Y2B1 443 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 TARBP1Q13395 1621 aaKnown RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 GADD45AP24522 165 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 FUT11Q495W5 492 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 OVOS1Q6IE37 1185 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 TMEM161BQ8NDZ6 487 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 TERB2Q8NHR7 220 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 C1GALT1C1Q96EU7 318 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PGAP3Q96FM1 320 aaPredicted RBP7.14□□□□□ -1.27
VPS53-204ENST00000437048 TPD52L3Q96J77 140 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PANX1Q96RD7 426 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 TBCDQ9BTW9 1192 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ZNF696Q9H7X3 374 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 NUDT15Q9NV35 164 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 PCDHGA11Q9Y5H2 935 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ACOX3O15254 700 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 RDH16O75452 317 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 IGKV5-2P06315 115 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SHC3Q92529 594 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 SLC27A6Q9Y2P4 619 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 ARHGAP23Q9P227 1491 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 I3L521 148 aa7.14□□□□□ -1.27
VPS53-204ENST00000437048 OR10H3O60404 316 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms