RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 RNF8O76064 485 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 TMCC1O94876 653 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 BAG2O95816 211 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 TPOP07202 933 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 ABCB1P08183 1280 aaPredicted RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 ZNF853P0CG23 659 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 MYBL1P10243 752 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 CYP2D6P10635 497 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 ZNF20P17024 532 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 ZNF182P17025 639 aaPredicted RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 CCND3P30281 292 aaPredicted RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 PIK3CAP42336 1068 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 RARRES1P49788 294 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 RBP5P82980 135 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 BFSP1Q12934 665 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 FOXE3Q13461 319 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 MYBPC2Q14324 1141 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 TCTN1Q2MV58 587 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 ZSCAN23Q3MJ62 389 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 CXorf66Q5JRM2 361 aaPredicted RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 DAB2IPQ5VWQ8 1189 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 AAGABQ6PD74 315 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 IL27RAQ6UWB1 636 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 CFAP77Q6ZQR2 320 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 SEPT14Q6ZU15 432 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 CYB5R4Q7L1T6 521 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 GPR142Q7Z601 462 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 THNSL1Q8IYQ7 743 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 PDCL2Q8N4E4 241 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 TMEM199Q8N511 208 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 PI4KAP1Q8N8J0 262 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 PIGKQ92643 395 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 SNAPC3Q92966 411 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 ATP6V1E2Q96A05 226 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 UROC1Q96N76 676 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 RAB3IPQ96QF0 476 aaPredicted RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 GCNAQ96QF7 691 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 TSPAN18Q96SJ8 248 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 PAIP2Q9BPZ3 127 aaKnown RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 MACROD1Q9BQ69 325 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 SIL1Q9H173 461 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 NDST4Q9H3R1 872 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 CXorf56Q9H5V9 222 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 DENND2DQ9H6A0 471 aaPredicted RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 KIF9Q9HAQ2 790 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 LTB4R2Q9NPC1 389 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 NENFQ9UMX5 172 aa4.16□□□□□ -1.74
HMGB3-203ENST00000430118 PPIEQ9UNP9 301 aaKnown RBP4.16□□□□□ -1.74
HMGB3-203ENST00000430118 hCG_1809904A0A1W2PP81 198 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 A0A1W2PPE2 198 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 A0A1W2PR64 198 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 TARSL2A2RTX5 802 aaKnown RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 GRID2IPA4D2P6 1211 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 A8MV72 311 aaPredicted RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 BTBD18B2RXH4 712 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 TARM1B6A8C7 271 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 C1QTNF3-AMACRE9PGA6 284 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 CTAGE5O15320 804 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 INPPL1O15357 1258 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 NEURL1O76050 574 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 NFATC1O95644 943 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 PLAUP00749 431 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 IGKV5-2P06315 115 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 HNRNPCP07910 306 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 MMP3P08254 477 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 CD63P08962 238 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 CCDC175P0C221 793 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 MYZAPP0CAP1 466 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 IFNAR1P17181 557 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 CTPS1P17812 591 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 HOXA5P20719 270 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 HOXA7P31268 230 aaPredicted RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 KRT2P35908 639 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 GYG1P46976 350 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 HMGCS2P54868 508 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 PSMC6P62333 389 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 PLIN5Q00G26 463 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 NHLH1Q02575 133 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 IKQ13123 557 aaPredicted RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 WDR43Q15061 677 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 ALG10Q5BKT4 473 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 ALG10BQ5I7T1 473 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 COLEC12Q5KU26 742 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 TTC39AQ5SRH9 613 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 KIAA0930Q6ICG6 404 aaPredicted RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 PLEKHA7Q6IQ23 1121 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 APOBEC3HQ6NTF7 200 aaKnown RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 ZNF813Q6ZN06 617 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 LINC00346Q8IVM7 164 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 TMEM217Q8N7C4 229 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 SLC44A5Q8NCS7 719 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 MCPH1Q8NEM0 835 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 AFAP1L1Q8TED9 768 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 RNF183Q96D59 192 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 ARSGQ96EG1 525 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 BBS4Q96RK4 519 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 HRH4Q9H3N8 390 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 TOR3AQ9H497 397 aa4.15□□□□□ -1.75
HMGB3-203ENST00000430118 RANGRFQ9HD47 186 aaPredicted RBP4.15□□□□□ -1.75
HMGB3-203ENST00000430118 SLC2A4RGQ9NR83 387 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms