RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RANBP9Q96S59 729 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 CCDC3Q9BQI4 270 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 STN1Q9H668 368 aaKnown RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 TAAR2Q9P1P5 351 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 PAK5Q9P286 719 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 TRIM10Q9UDY6 481 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 PCDHGA7Q9Y5G6 932 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 FREM2Q5SZK8 3169 aa9.04□□□□□ -0.96
SMC1A-203ENST00000428014 COL27A1Q8IZC6 1860 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-203ENST00000428014 DMXL2Q8TDJ6 3036 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 SPEGQ15772 3267 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 AKAP13Q12802 2813 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 IGLV3-16A0A075B6K0 115 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 TRBV5-4A0A0C4DH59 114 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 GLYATL1P3A0A0U1RQE8 302 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 C17orf113A0A1B0GUU1 675 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 TRABD2BA6NFA1 517 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 A8MX80 341 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 D6RAR5 112 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 F8W8V4 182 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 STX7O15400 261 aaKnown RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 TOX3O15405 576 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 GRID2O43424 1007 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CPNE6O95741 557 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 XRCC1P18887 633 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 PSMB4P28070 264 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 MAGEA6P43360 314 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 PLOD1Q02809 727 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 ACVR1Q04771 509 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CDH17Q12864 832 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 TARDBPQ13148 414 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 SPIDRQ14159 915 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 SIX1Q15475 284 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 PCSK7Q16549 785 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CYP1B1Q16678 543 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 ST3GAL2Q16842 350 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 LONRF2Q1L5Z9 754 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 GUSBP11Q6P575 273 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 IYDQ6PHW0 289 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 WDR74Q6RFH5 385 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 SPRED1Q7Z699 444 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CLEC14AQ86T13 490 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 SLC9B2Q86UD5 537 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 LRRTM4Q86VH4 590 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 NAGSQ8N159 534 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CARFQ8N187 725 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 PNPLA1Q8N8W4 532 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 IPMKQ8NFU5 416 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 WDR36Q8NI36 951 aaKnown RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 ZDHHC1Q8WTX9 485 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 STYXQ8WUJ0 223 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CCDC97Q96F63 343 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-203ENST00000428014 AGAP2Q99490 1192 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 TBL1YQ9BQ87 522 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 SPATA16Q9BXB7 569 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 CEP41Q9BYV8 373 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 STRADBQ9C0K7 418 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 RAB33BQ9H082 229 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 DPEP2Q9H4A9 486 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 POLR1BQ9H9Y6 1135 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 KCND1Q9NSA2 647 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 POT1Q9NUX5 634 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 SPO11Q9Y5K1 396 aa9.03□□□□□ -0.96
SMC1A-203ENST00000428014 FRYQ5TBA9 3013 aa9.02□□□□□ -0.96
SMC1A-203ENST00000428014 MYLKQ15746 1914 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 CCDC187A0A096LP49 1063 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 MROH6A6NGR9 719 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 C1QTNF9BB2RNN3 333 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 CFAP99D6REC4 459 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 GAPDHSO14556 408 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 LDB2O43679 373 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 CDK14O94921 469 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 AP2A2O94973 939 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 TOP3BO95985 862 aaKnown RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 GAS8O95995 478 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ITGA2BP08514 1039 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 C1QTNF9P0C862 333 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 RALBP11234 206 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 CD82P27701 267 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ACTR1BP42025 376 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 GNPDA1P46926 289 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF140P52738 457 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ACTR1AP61163 376 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 XIAPP98170 497 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 B4GALNT1Q00973 533 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 SEMG2Q02383 582 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 TMEM115Q12893 351 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-203ENST00000428014 NFATC2Q13469 925 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 C1orf61Q13536 156 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 GTF2H3Q13889 308 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ITIH4Q14624 930 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 SKIDA1Q1XH10 827 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 BCL7AQ4VC05 210 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 ATP13A5Q4VNC0 1218 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 LYPLAL1Q5VWZ2 237 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 DENND2CQ68D51 928 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 CERS6Q6ZMG9 384 aa9.02□□□□□ -0.97
SMC1A-203ENST00000428014 RD3Q7Z3Z2 195 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms