RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PRAMEP78395 509 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 TMEM115Q12893 351 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-209ENST00000425836 BBS9Q3SYG4 887 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 GLE1Q53GS7 698 aaKnown RBP24.21■■□□□ 1.47
VEGFA-209ENST00000425836 PYCR3Q53H96 274 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 AFTPHQ6ULP2 937 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 TMEM135Q86UB9 458 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 PIANPQ8IYJ0 282 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 NXPE1Q8N323 547 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 OR4L1Q8NH43 312 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 CLPBQ9H078 707 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 TMEM168Q9H0V1 697 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 RMI1Q9H9A7 625 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 MYLKQ15746 1914 aa24.21■■□□□ 1.47
VEGFA-209ENST00000425836 AQP9O43315 295 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 CDK14O94921 469 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 CELA2BP08218 269 aaPredicted RBP24.2■■□□□ 1.47
VEGFA-209ENST00000425836 CTSEP14091 401 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 ARL4CP56559 192 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 HIF1AQ16665 826 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 ANKRD20A4Q4UJ75 823 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 PSAPL1Q6NUJ1 521 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 TAS2R42Q7RTR8 314 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 SEC14L1Q92503 715 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 ART4Q93070 314 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 STAMBPL1Q96FJ0 436 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 SGSM3Q96HU1 749 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 FCRL3Q96P31 734 aaPredicted RBP24.2■■□□□ 1.47
VEGFA-209ENST00000425836 DMGDHQ9UI17 866 aaKnown RBP24.2■■□□□ 1.47
VEGFA-209ENST00000425836 PRKAB1Q9Y478 270 aa24.2■■□□□ 1.47
VEGFA-209ENST00000425836 PIEZO1Q92508 2521 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 ESYT3A0FGR9 886 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 GPR89AB7ZAQ6 455 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 BHMG1C9JSJ3 638 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-209ENST00000425836 SLC30A4O14863 429 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 GPR89BP0CG08 455 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 ARNTP27540 789 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 GUCY2DQ02846 1103 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 TCEA2Q15560 299 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 SERPINA9Q86WD7 417 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 GALNT13Q8IUC8 556 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 EBNA1BP2Q99848 306 aaKnown RBP24.2■■□□□ 1.46
VEGFA-209ENST00000425836 ZNHIT2Q9UHR6 403 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 CDV3Q9UKY7 258 aaKnown RBP24.2■■□□□ 1.46
VEGFA-209ENST00000425836 BTBD3Q9Y2F9 522 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 GPSM3Q9Y4H4 160 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 CSNK1G3Q9Y6M4 447 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 RPS6KL1Q9Y6S9 549 aa24.2■■□□□ 1.46
VEGFA-209ENST00000425836 TM4SF5O14894 197 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 CHUKO15111 745 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 GRID2O43424 1007 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 SH3BP5O60239 455 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 VAPBO95292 243 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 GIMD1P0DJR0 217 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 ACRV1P26436 265 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 PLTPP55058 493 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 ELOCQ15369 112 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 RSPO4Q2I0M5 234 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-209ENST00000425836 ZDHHC24Q6UX98 284 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 IGDCC3Q8IVU1 814 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 FSTL5Q8N475 847 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-209ENST00000425836 RASGEF1AQ8N9B8 481 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 LRRN4CLQ8ND94 238 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 CCL4L1Q8NHW4 92 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 ZNF669Q96BR6 464 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-209ENST00000425836 CCDC97Q96F63 343 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-209ENST00000425836 OR2M4Q96R27 311 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 TRNAU1APQ9NX07 287 aaKnown RBP24.19■■□□□ 1.46
VEGFA-209ENST00000425836 PLEKHM1Q9Y4G2 1056 aa24.19■■□□□ 1.46
VEGFA-209ENST00000425836 TMEM131Q92545 1883 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 ZCWPW2A0A1B0GU75 182 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 NEMP2A6NFY4 417 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 FLRT2O43155 660 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 USP1O94782 785 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 MSH3P20585 1137 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 AKT1P31749 480 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 ARCN1P48444 511 aaKnown RBP24.18■■□□□ 1.46
VEGFA-209ENST00000425836 B4GALNT1Q00973 533 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 CAV1Q03135 178 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 CBLBQ13191 982 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 DBN1Q16643 649 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 HP1BP3Q5SSJ5 553 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-209ENST00000425836 KIAA0930Q6ICG6 404 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-209ENST00000425836 PIP4P1Q86T03 277 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 PNPLA1Q8N8W4 532 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 SETD7Q8WTS6 366 aaKnown RBP24.18■■□□□ 1.46
VEGFA-209ENST00000425836 TTC25Q96NG3 672 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 COPS8Q99627 209 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 WDR83Q9BRX9 315 aaKnown RBP24.18■■□□□ 1.46
VEGFA-209ENST00000425836 ZCCHC2Q9C0B9 1178 aaKnown RBP24.18■■□□□ 1.46
VEGFA-209ENST00000425836 ZDHHC3Q9NYG2 299 aa24.18■■□□□ 1.46
VEGFA-209ENST00000425836 FFAR2O15552 330 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 PGAM1P18669 254 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 ELK3P41970 407 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 GRK6P43250 576 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 GTF2H3Q13889 308 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 FASTKD1Q53R41 847 aaKnown RBP24.17■■□□□ 1.46
VEGFA-209ENST00000425836 ZNF547Q8IVP9 402 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 NAXDQ8IW45 347 aa24.17■■□□□ 1.46
VEGFA-209ENST00000425836 FBXO25Q8TCJ0 367 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms