RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TP53INP2Q8IXH6 220 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GALNT6Q8NCL4 622 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GALNT11Q8NCW6 608 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GDAP1Q8TB36 358 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 UBXN4Q92575 508 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 FATE1Q969F0 183 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MIB2Q96AX9 1013 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ELMO2Q96JJ3 720 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 NSMCE3Q96MG7 304 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TSGA13Q96PP4 275 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GBP4Q96PP9 640 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TDRD1Q9BXT4 1180 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MAK16Q9BXY0 300 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GPR63Q9BZJ6 419 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ISCUQ9H1K1 167 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 OR2AG1Q9H205 316 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZNF768Q9H5H4 540 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ATXN10Q9UBB4 475 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MN1Q10571 1320 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 A6NCN8 305 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SPAG6O75602 509 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CDK14O94921 469 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SOD1P00441 154 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KRT7P08729 469 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZNF7P17097 686 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PRKCIP41743 596 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PGDP52209 483 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PMS2P54278 862 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MLLT10P55197 1068 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 DNASE1L3Q13609 305 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PAFAH1B3Q15102 231 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TMTC4Q5T4D3 741 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 HENMT1Q5T8I9 393 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZDHHC20Q5W0Z9 365 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 IRGCQ6NXR0 463 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 RFLNAQ6ZTI6 216 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZNF571Q7Z3V5 609 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 HPS6Q86YV9 775 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 APLFQ8IW19 511 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TRAM1L1Q8N609 369 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MAML1Q92585 1016 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SLC25A23Q9BV35 468 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZCCHC2Q9C0B9 1178 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ANAPC7Q9UJX3 599 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TLK1Q9UKI8 766 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PCDHGB7Q9Y5F8 929 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PCDHGA6Q9Y5G7 932 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GTF3C3Q9Y5Q9 886 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 OAS3Q9Y6K5 1087 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PIEZO2Q9H5I5 2752 aa12.09□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TENM4Q6N022 2769 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 UBA6A0AVT1 1052 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ENO4A6NNW6 628 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 DDX3XO00571 662 aaKnown RBP eCLIP12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 KLHL41O60662 606 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 EML2O95834 649 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SERPINC1P01008 464 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 FGF5P12034 268 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ZNF8P17098 575 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 IL1R2P27930 398 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 GALNT2Q10471 571 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PTPRRQ15256 657 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ABRAXAS1Q6UWZ7 409 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PRSS42Q7Z5A4 293 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 KMT5CQ86Y97 462 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 BEND7Q8N7W2 519 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 NIPA2Q8N8Q9 360 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CPT1CQ8TCG5 803 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 GLYATL1Q969I3 302 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PSMG3-AS1Q96PY0 264 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 TIMM29Q9BSF4 260 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CBX8Q9HC52 389 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SLAMF7Q9NQ25 335 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 LHX9Q9NQ69 397 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CUEDC1Q9NWM3 386 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 MAP10Q9P2G4 905 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 EPHA6Q9UF33 1036 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 DNAJC16Q9Y2G8 782 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ZNF451Q9Y4E5 1061 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 MRPS18BQ9Y676 258 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 AHCTF1Q8WYP5 2266 aa12.08□□□□□ -0.48
HLA-DQB3-203ENST00000425319 A0A0U1RQS6 177 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 DPM1O60762 260 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 DDAH2O95865 285 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 JCHAINP01591 159 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SLC19A1P41440 591 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CD86P42081 329 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 CCL11P51671 97 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 UBE2IP63279 158 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 ATMQ13315 3056 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 SEMA5AQ13591 1074 aa12.07□□□□□ -0.48
HLA-DQB3-203ENST00000425319 PLCL1Q15111 1095 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms