RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 OR2M4Q96R27 311 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 FAM96AQ9H5X1 160 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 TRNAU1APQ9NX07 287 aaKnown RBP25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 DLL3Q9NYJ7 618 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 NLGN3Q9NZ94 848 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 SLC2A6Q9UGQ3 507 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 PCOLCE2Q9UKZ9 415 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 TMPRSS11EQ9UL52 423 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 SNX24Q9Y343 169 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 LRP4O75096 1905 aa25.13■■□□□ 1.61
TSPAN3-203ENST00000424443 LMO7DNF2Z398 122 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 NUAK1O60285 661 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 FUCA1P04066 466 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 RALBP11234 206 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 ZNF8P17098 575 aaPredicted RBP25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 CSRP1P21291 193 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 ID4P47928 161 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 ARSDP51689 593 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 CALCOCO2Q13137 446 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DNTTIP2Q5QJE6 756 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 AFTPHQ6ULP2 937 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 CEP112Q8N8E3 955 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DCUN1D1Q96GG9 259 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 CDC6Q99741 560 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 KIFC1Q9BW19 673 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 GSDMCQ9BYG8 508 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 CLPBQ9H078 707 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DPH5Q9H2P9 285 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 SOX13Q9UN79 622 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DMXL1Q9Y485 3027 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 CCDC162PA2VCL2 907 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 GRID2O43424 1007 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DNAJC6O75061 913 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 PSMA3P25788 255 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 RPL21P46778 160 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 ACVR1Q04771 509 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DEFB133Q30KQ1 61 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 PYCR3Q53H96 274 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DNAJC21Q5F1R6 531 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 OR4C6Q8NH72 309 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 TTC1Q99614 292 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 FTSJ1Q9UET6 329 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 MAD1L1Q9Y6D9 718 aa25.12■■□□□ 1.61
TSPAN3-203ENST00000424443 DCDC2BA2VCK2 349 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 CFAP99D6REC4 459 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 CELA2BP08218 269 aaPredicted RBP25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 PAMP19021 973 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 KCNA4P22459 653 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 HIBCHQ6NVY1 386 aaPredicted RBP25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 CHST15Q7LFX5 561 aaPredicted RBP25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 PDIK1LQ8N165 341 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 NXPE1Q8N323 547 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 MPP5Q8N3R9 675 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 OR4L1Q8NH43 312 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 HEXDCQ8WVB3 486 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 COPS8Q99627 209 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 PRKAB1Q9Y478 270 aa25.11■■□□□ 1.61
TSPAN3-203ENST00000424443 AGAP14A8MT82 685 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 TPP1O14773 563 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 YY2O15391 372 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 LDOC1O95751 146 aaPredicted RBP25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 GOT2P00505 430 aaKnown RBP25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 NMBRP28336 390 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 NOVA1P51513 510 aaKnown RBP25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 LRP8Q14114 963 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 KHDC1Q4VXA5 237 aaKnown RBP25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 FASTKD1Q53R41 847 aaKnown RBP25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 LVRNQ6Q4G3 990 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 LRRTM4Q86VH4 590 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 TRAPPC5Q8IUR0 188 aa25.1■■□□□ 1.61
TSPAN3-203ENST00000424443 OR51F1A6NGY5 319 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 KMOO15229 486 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 CEACAM1P13688 526 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 PPARGP37231 505 aaPredicted RBP25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 MAGEA3P43357 314 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 CTBSQ01459 385 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 CRTC3Q6UUV7 619 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 CES3Q6UWW8 571 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 SERPINA9Q86WD7 417 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 GLMNQ92990 594 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 MFSD3Q96ES6 412 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 CNDP2Q96KP4 475 aaKnown RBP25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 TREX1Q9NSU2 369 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 ZDHHC3Q9NYG2 299 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 WHRNQ9P202 907 aa25.09■■□□□ 1.61
TSPAN3-203ENST00000424443 FAM237BA0A1B0GVD1 139 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 TRIM38O00635 465 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 SIGLEC6O43699 453 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 ACRV1P26436 265 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 CA5AP35218 305 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 CDKN1CP49918 316 aaPredicted RBP25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 ARL4CP56559 192 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 TRIP6Q15654 476 aaKnown RBP25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 BBS9Q3SYG4 887 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 LYPLAL1Q5VWZ2 237 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 PSAPL1Q6NUJ1 521 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 ZCCHC8Q6NZY4 707 aaKnown RBP25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 FAM46DQ8NEK8 389 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 CCL4L1Q8NHW4 92 aa25.08■■□□□ 1.61
TSPAN3-203ENST00000424443 GPBAR1Q8TDU6 330 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms