RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GMEB2Q9UKD1 530 aa11.15□□□□□ -0.63
PTCH1-205ENST00000418258 TNFRSF21O75509 655 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 TACR2P21452 398 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 DHPSP49366 369 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 RAB2AP61019 212 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PCDH1Q08174 1060 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 OTOP3Q7RTS5 596 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 RPL10LQ96L21 214 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PCYOX1Q9UHG3 505 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 TRAF6Q9Y4K3 522 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 HAT1O14929 419 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 SYN3O14994 580 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 C8AP07357 584 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 DBTP11182 482 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 ATXN1P54253 815 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 SETD7Q8WTS6 366 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 RNF121Q9H920 327 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 TRPS1Q9UHF7 1281 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 DHRS12A0PJE2 317 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 EEF1DP3Q658K8 133 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 P4HA3Q7Z4N8 544 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 KBTBD2Q8IY47 623 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 FATE1Q969F0 183 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 LRCH1Q9Y2L9 728 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 URB1O60287 2271 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PSMD9O00233 223 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 SNAP91O60641 907 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 LGR5O75473 907 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 DNASE1L1P49184 302 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 RPIAP49247 311 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 CDH13P55290 713 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 TSSK3Q96PN8 268 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 GLOD4Q9HC38 313 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PACSIN3Q9UKS6 424 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 USP2O75604 605 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 LDOC1O95751 146 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 ADSSP30520 456 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 GNALP38405 381 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PLGLB1Q02325 96 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 OC90Q02509 493 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 GAD2Q05329 585 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 SLC20A2Q08357 652 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 HSPB3Q12988 150 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 GPM6BQ13491 265 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 SGCBQ16585 318 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 KCT2Q8NC54 265 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 KLHL32Q96NJ5 620 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 HIST1H2AAQ96QV6 131 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 C11orf84Q9BUA3 381 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PHF24Q9UPV7 400 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 IRGMA1A4Y4 181 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 RHBDL3P58872 404 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 BNIP2Q12982 314 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 CXorf57Q6NSI4 855 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 ZCCHC12Q6PEW1 402 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 ARCQ7LC44 396 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 TSTD1Q8NFU3 115 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 DPYSL5Q9BPU6 564 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PNO1Q9NRX1 252 aaKnown RBP11.14□□□□□ -0.63
PTCH1-205ENST00000418258 PCDHA2Q9Y5H9 948 aa11.14□□□□□ -0.63
PTCH1-205ENST00000418258 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 HCN1O60741 890 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 DBIP07108 87 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 CCKBRP32239 447 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ZACNQ401N2 412 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 UBXN11Q5T124 520 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 HECTD2Q5U5R9 776 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 MED27Q6P2C8 311 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 NET1Q7Z628 596 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 GALNT5Q7Z7M9 940 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 PIK3C3Q8NEB9 887 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ATG10Q9H0Y0 220 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 GGA2Q9UJY4 613 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 CLCN7P51798 805 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 RGS8P57771 180 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 LRRC73Q5JTD7 316 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 SLC34A3Q8N130 599 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ZNF433Q8N7K0 673 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 MAML3Q96JK9 1138 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 FAM192AQ9GZU8 254 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 L2HGDHQ9H9P8 463 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 PLGRKTQ9HBL7 147 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 INTS10Q9NVR2 710 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 DNAJC28Q9NX36 388 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 MIOSQ9NXC5 875 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 GTF2IRD1Q9UHL9 959 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 SAMD4AQ9UPU9 718 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ZNF536O15090 1300 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 MLLT3P42568 568 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 CDH4P55283 916 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 GFOD2Q3B7J2 385 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 INTS6LQ5JSJ4 861 aaKnown RBP11.13□□□□□ -0.63
PTCH1-205ENST00000418258 ABHD15Q6UXT9 468 aa11.13□□□□□ -0.63
PTCH1-205ENST00000418258 SPATA19Q7Z5L4 167 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms