RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 NKX2-8O15522 239 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 ARHGAP6O43182 974 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 GRID2O43424 1007 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 AKR1B10O60218 316 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 RAD1O60671 282 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 KATNA1O75449 491 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 MTA2O94776 668 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 EML2O95834 649 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 VIPP01282 170 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 CYP1A2P05177 515 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 HLA-DQB2P05538 268 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 TPM3P06753 285 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 KRT7P08729 469 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 THRAP10827 490 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 SLC2A4P14672 509 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 MX2P20592 715 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 IL4RP24394 825 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 RPL10P27635 214 aaKnown RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 CASP14P31944 242 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 CSF2RBP32927 897 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 CSRP3P50461 194 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 STC1P52823 247 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 POLE2P56282 527 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 RAB15P59190 212 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 TAS2R40P59535 323 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 ZBED6P86452 979 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 GBE1Q04446 702 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 NIPAL4Q0D2K0 466 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 GALNT2Q10471 571 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 CBLBQ13191 982 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 TRA2AQ13595 282 aaKnown RBP eCLIP6.9□□□□□ -1.3
COPS3-202ENST00000417352 CLCA4Q14CN2 919 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 LLGL1Q15334 1064 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 DEFB109BQ30KR1 87 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 COLEC12Q5KU26 742 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 NCBP2-AS2Q69YL0 99 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 IYDQ6PHW0 289 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 CEACAM20Q6UY09 585 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 ZNF438Q7Z4V0 828 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 CPNE8Q86YQ8 564 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 RFX6Q8HWS3 928 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 RASGRP3Q8IV61 690 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 NLGN4XQ8N0W4 816 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 TEX26Q8N6G2 289 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 NLGN4YQ8NFZ3 816 aaPredicted RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 TGM7Q96PF1 710 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 MCCC1Q96RQ3 725 aaPredicted RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 DPYSL5Q9BPU6 564 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 TBC1D10AQ9BXI6 508 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 TDRD1Q9BXT4 1180 aaKnown RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 ULBP3Q9BZM4 244 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 SLC25A18Q9H1K4 315 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 ZFYVE1Q9HBF4 777 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 SLC24A3Q9HC58 644 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 BPIFA1Q9NP55 256 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 ZNHIT6Q9NWK9 470 aaKnown RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 IFNKQ9P0W0 207 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 RCOR3Q9P2K3 495 aaPredicted RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 ATXN10Q9UBB4 475 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 ACSL6Q9UKU0 697 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 OAS3Q9Y6K5 1087 aaKnown RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 SDK2Q58EX2 2172 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 COL6A6A6NMZ7 2263 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 A0A1W2PQJ5 194 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 ZNF891A8MT65 544 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 FADS2P1A8MWK0 482 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 F5H423 210 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 APOL1O14791 398 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 DNAJC6O75061 913 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 MTX2O75431 263 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 PMPCBO75439 489 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 SOD1P00441 154 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 KRT1P04264 644 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 TPM1P09493 284 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 H2AFZP0C0S5 128 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 F3P13726 295 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 ZNF8P17098 575 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 MAP4P27816 1152 aaKnown RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 SPINT3P49223 89 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 ARL4DP49703 201 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 DRG2P55039 364 aaKnown RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 TLE1Q04724 770 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 SLC10A2Q12908 348 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 KCNAB2Q13303 367 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 GTF2H3Q13889 308 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 SEPT6Q14141 434 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 PAFAH1B3Q15102 231 aaKnown RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 CLPPQ16740 277 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 SKIDA1Q1XH10 827 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 ZNF569Q5MCW4 686 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 KAZNQ674X7 775 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 HGSNATQ68CP4 663 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 IRGCQ6NXR0 463 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 WDR74Q6RFH5 385 aaPredicted RBP6.89□□□□□ -1.31
COPS3-202ENST00000417352 XKR5Q6UX68 686 aa6.89□□□□□ -1.31
COPS3-202ENST00000417352 FAM92BQ6ZTR7 304 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms