RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 SPO11Q9Y5K1 396 aa3.04□□□□□ -1.92
APP-207ENST00000415997 NOX1Q9Y5S8 564 aa3.04□□□□□ -1.92
APP-207ENST00000415997 CNTRLQ7Z7A1 2325 aa3.04□□□□□ -1.92
APP-207ENST00000415997 CACNA1CQ13936 2221 aa3.04□□□□□ -1.92
APP-207ENST00000415997 NCOA6Q14686 2063 aaPredicted RBP3.04□□□□□ -1.92
APP-207ENST00000415997 UNC13CQ8NB66 2214 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3DA0A087WVF3 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 A0A087WWV3 80 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3IA0A087WXS9 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3EA0A087X179 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3KA0A087X1G2 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 A0A0U1RQS6 177 aa3.03□□□□□ -1.92
APP-207ENST00000415997 VWA3AA6NCI4 1184 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3FA6NER0 549 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 LRRC3CA6NJW4 275 aa3.03□□□□□ -1.92
APP-207ENST00000415997 LACTBL1A8MY62 500 aa3.03□□□□□ -1.92
APP-207ENST00000415997 KPNA7A9QM74 516 aa3.03□□□□□ -1.92
APP-207ENST00000415997 B4E171 279 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3LB9A6J9 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 F8VP50 259 aa3.03□□□□□ -1.92
APP-207ENST00000415997 K7ERI5 159 aa3.03□□□□□ -1.92
APP-207ENST00000415997 XPOTO43592 962 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 DNAJC8O75937 253 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 CDKL5O76039 1030 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CLTAP09496 248 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3HP0C7X1 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 IRF1P10914 325 aa3.03□□□□□ -1.92
APP-207ENST00000415997 C5AR1P21730 350 aa3.03□□□□□ -1.92
APP-207ENST00000415997 FDXRP22570 491 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CD40P25942 277 aa3.03□□□□□ -1.92
APP-207ENST00000415997 HOXD9P28356 352 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 GNA11P29992 359 aa3.03□□□□□ -1.92
APP-207ENST00000415997 MAT2AP31153 395 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 HNRNPH3P31942 346 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 TSPAN7P41732 249 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TAF6P49848 677 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ZNF81P51508 661 aa3.03□□□□□ -1.92
APP-207ENST00000415997 METAP1P53582 386 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ADKP55263 362 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 NRG3P56975 720 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CSNK1G2P78368 415 aa3.03□□□□□ -1.92
APP-207ENST00000415997 BLOC1S1P78537 153 aa3.03□□□□□ -1.92
APP-207ENST00000415997 FOLH1Q04609 750 aa3.03□□□□□ -1.92
APP-207ENST00000415997 Q0VFX4 171 aa3.03□□□□□ -1.92
APP-207ENST00000415997 EIF2B5Q13144 721 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 LAMB3Q13751 1172 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ERV3-1Q14264 604 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ZNF169Q14929 603 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 PPP2R5AQ15172 486 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CEBPEQ15744 281 aa3.03□□□□□ -1.92
APP-207ENST00000415997 NPY5RQ15761 445 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CHRNA6Q15825 494 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CLPPQ16740 277 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 POM121L1PQ3SYA9 428 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CERCAMQ5T4B2 595 aa3.03□□□□□ -1.92
APP-207ENST00000415997 FAM102AQ5T9C2 384 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3GQ6DHY5 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3CQ6IPX1 549 aa3.03□□□□□ -1.92
APP-207ENST00000415997 PLEKHA7Q6IQ23 1121 aa3.03□□□□□ -1.92
APP-207ENST00000415997 IGFL3Q6UXB1 125 aa3.03□□□□□ -1.92
APP-207ENST00000415997 KYAT3Q6YP21 454 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 SYNE3Q6ZMZ3 975 aa3.03□□□□□ -1.92
APP-207ENST00000415997 Q6ZSR6 202 aa3.03□□□□□ -1.92
APP-207ENST00000415997 MAEAQ7L5Y9 396 aa3.03□□□□□ -1.92
APP-207ENST00000415997 PARGQ86W56 976 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CATSPER3Q86XQ3 398 aa3.03□□□□□ -1.92
APP-207ENST00000415997 RAB11FIP4Q86YS3 637 aa3.03□□□□□ -1.92
APP-207ENST00000415997 SPATA2LQ8IUW3 424 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 MMAAQ8IVH4 418 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 CEP97Q8IW35 865 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TPH2Q8IWU9 490 aa3.03□□□□□ -1.92
APP-207ENST00000415997 RHOT1Q8IXI2 618 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ZZZ3Q8IYH5 903 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TBC1D3Q8IZP1 549 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 TMEM86AQ8N2M4 240 aa3.03□□□□□ -1.92
APP-207ENST00000415997 KDM1BQ8NB78 822 aa3.03□□□□□ -1.92
APP-207ENST00000415997 GPR156Q8NFN8 814 aa3.03□□□□□ -1.92
APP-207ENST00000415997 PPP1R14CQ8TAE6 165 aa3.03□□□□□ -1.92
APP-207ENST00000415997 GANCQ8TET4 914 aa3.03□□□□□ -1.92
APP-207ENST00000415997 SCARB1Q8WTV0 552 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ART4Q93070 314 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TTC17Q96AE7 1141 aa3.03□□□□□ -1.92
APP-207ENST00000415997 RNF31Q96EP0 1072 aa3.03□□□□□ -1.92
APP-207ENST00000415997 LMLNQ96KR4 655 aa3.03□□□□□ -1.92
APP-207ENST00000415997 BMFQ96LC9 184 aa3.03□□□□□ -1.92
APP-207ENST00000415997 TEFMQ96QE5 360 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 OMDQ99983 421 aa3.03□□□□□ -1.92
APP-207ENST00000415997 SLX1AQ9BQ83 275 aa3.03□□□□□ -1.92
APP-207ENST00000415997 EIF2AK1Q9BQI3 630 aaKnown RBP3.03□□□□□ -1.92
APP-207ENST00000415997 TCHPQ9BT92 498 aa3.03□□□□□ -1.92
APP-207ENST00000415997 LRRC61Q9BV99 259 aa3.03□□□□□ -1.92
APP-207ENST00000415997 CALN1Q9BXU9 219 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ALOXE3Q9BYJ1 711 aa3.03□□□□□ -1.92
APP-207ENST00000415997 PLA2G12AQ9BZM1 189 aa3.03□□□□□ -1.92
APP-207ENST00000415997 SPRTNQ9H040 489 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 TCEAL2Q9H3H9 227 aaPredicted RBP3.03□□□□□ -1.92
APP-207ENST00000415997 SYNDIG1Q9H7V2 258 aa3.03□□□□□ -1.92
APP-207ENST00000415997 ZMAT4Q9H898 229 aa3.03□□□□□ -1.92
APP-207ENST00000415997 KMT5AQ9NQR1 393 aa3.03□□□□□ -1.92
APP-207ENST00000415997 RBM28Q9NW13 759 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms