RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 GID8Q9NWU2 228 aa13.78□□□□□ -0.2
AC239798.2-201ENST00000415338 LSM7Q9UK45 103 aaKnown RBP13.78□□□□□ -0.2
AC239798.2-201ENST00000415338 PRR23AA6NEV1 266 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 SYCE1LA8MT33 242 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 CLDN11O75508 207 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 CHRM1P11229 460 aaPredicted RBP13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 ITPKAP23677 461 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 EPHB3P54753 998 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 TLE2Q04725 743 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 NOGQ13253 232 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 NEDD8Q15843 81 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 TMTC4Q5T4D3 741 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 SLC2A7Q6PXP3 512 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 DDX53Q86TM3 631 aaKnown RBP13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 LRRC49Q8IUZ0 686 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 CMTM8Q8IZV2 173 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 LILRA2Q8N149 483 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 TSSK3Q96PN8 268 aa13.77□□□□□ -0.2
AC239798.2-201ENST00000415338 RGPD3A6NKT7 1758 aaPredicted RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 RGPD4Q7Z3J3 1758 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ARVCFO00192 962 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ZNF189O75820 626 aaPredicted RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 STC2O76061 302 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 LRG1P02750 347 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 LCP2Q13094 533 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ZNF423Q2M1K9 1284 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 SERPINA9Q86WD7 417 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 OR56A4Q8NGH8 313 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 SLC39A13Q96H72 371 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ZBTB18Q99592 522 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ARL15Q9NXU5 204 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 A0A1B0GVM2 712 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 MYO1GB0I1T2 1018 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ATP5BP06576 529 aaKnown RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ALDOCP09972 364 aaKnown RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 HTR6P50406 440 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 NEK2P51955 445 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ADGRE1Q14246 886 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 CBX2Q14781 532 aaPredicted RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 LIN52Q52LA3 116 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 TMEM214Q6NUQ4 689 aaKnown RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 SLC22A15Q8IZD6 547 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 APCDD1Q8J025 514 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 PNPT1Q8TCS8 783 aaKnown RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 CCDC28BQ9BUN5 200 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 IPPKQ9H8X2 491 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 WARS2Q9UGM6 360 aaKnown RBP13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 ASB1Q9Y576 335 aa13.77□□□□□ -0.21
AC239798.2-201ENST00000415338 DHRS12A0PJE2 317 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 ITGALP20701 1170 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 RGS4P49798 205 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 CDKL1Q00532 357 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 TMED1Q13445 227 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 SLC5A9Q2M3M2 681 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 PIGGQ5H8A4 983 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 ADGRF1Q5T601 910 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 GCNT7Q6ZNI0 430 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 C2orf73Q8N5S3 287 aaPredicted RBP13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 MED8Q96G25 268 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 FEM1CQ96JP0 617 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 BBS2Q9BXC9 721 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 ZFYVE1Q9HBF4 777 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 OR2AG2A6NM03 316 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 CASQ2O14958 399 aaPredicted RBP13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 CCL16O15467 120 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 NR4A1P22736 598 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 TTPAP49638 278 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 GTF2H3Q13889 308 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 PTGR1Q14914 329 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 STK32CQ86UX6 486 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 KBTBD6Q86V97 674 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 TMEM151AQ8N4L1 468 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 C1orf74Q96LT6 269 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 MTG2Q9H4K7 406 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 LIMD1Q9UGP4 676 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 ALDH1A1P00352 501 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 CAPN3P20807 821 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 HALP42357 657 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 CDH4P55283 916 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 SDCCAG3Q96C92 435 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 RIC8BQ9NVN3 520 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 IKZF3Q9UKT9 509 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 VPS4AQ9UN37 437 aa13.76□□□□□ -0.21
AC239798.2-201ENST00000415338 NEDD8-MDP1E9PL57 170 aa13.75□□□□□ -0.21
AC239798.2-201ENST00000415338 FBP2O00757 339 aa13.75□□□□□ -0.21
AC239798.2-201ENST00000415338 PRMT5O14744 637 aaPredicted RBP13.75□□□□□ -0.21
AC239798.2-201ENST00000415338 SLC22A3O75751 556 aa13.75□□□□□ -0.21
AC239798.2-201ENST00000415338 IGLV3-25P01717 112 aa13.75□□□□□ -0.21
AC239798.2-201ENST00000415338 ABCB1P08183 1280 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms