RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 ZNF8P17098 575 aaPredicted RBP17.53■□□□□ 0.4
SBDS-202ENST00000414306 PSMA3P25788 255 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 ARNTP27540 789 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 ARRB1P49407 418 aaPredicted RBP17.53■□□□□ 0.4
SBDS-202ENST00000414306 CARSP49589 748 aaKnown RBP17.53■□□□□ 0.4
SBDS-202ENST00000414306 CAV1Q03135 178 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 BNIP3Q12983 259 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 C1orf61Q13536 156 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 SEMA3AQ14563 771 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 ZNF423Q2M1K9 1284 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 PLA2G4EQ3MJ16 856 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 CRTC3Q6UUV7 619 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 ADGRG6Q86SQ4 1221 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 SERPINA9Q86WD7 417 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 NXPE1Q8N323 547 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 ERVMER34-1Q9H9K5 563 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 TMEM9BQ9NQ34 198 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 CATSPERZQ9NTU4 200 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 ZC3H7BQ9UGR2 993 aaKnown RBP17.53■□□□□ 0.4
SBDS-202ENST00000414306 SLC17A4Q9Y2C5 497 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 TEX264Q9Y6I9 313 aa17.53■□□□□ 0.4
SBDS-202ENST00000414306 ZFC3H1O60293 1989 aaKnown RBP17.53■□□□□ 0.4
SBDS-202ENST00000414306 A0A1B0GTQ1 180 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 ZCWPW2A0A1B0GU75 182 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 MAGEB16A2A368 324 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 CDX4O14627 284 aaPredicted RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 USP1O94782 785 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 CSF2P04141 144 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 POLBP06746 335 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 CELA2BP08218 269 aaPredicted RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 NME1P15531 152 aaKnown RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 MSH3P20585 1137 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 HK3P52790 923 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 CRYMQ14894 314 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 DBN1Q16643 649 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 FASTKD1Q53R41 847 aaKnown RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 PRRT3Q5FWE3 981 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 KIAA0930Q6ICG6 404 aaPredicted RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 TMEM135Q86UB9 458 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 ALYREFQ86V81 257 aaKnown RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 DDHD1Q8NEL9 900 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 PEX13Q92968 403 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 ULK4Q96C45 1275 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 TTC25Q96NG3 672 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 C19orf43Q9BQ61 176 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 BOCQ9BWV1 1114 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 SLC13A1Q9BZW2 595 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 TRIM39Q9HCM9 518 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 C20orf96Q9NUD7 363 aaPredicted RBP17.52■□□□□ 0.4
SBDS-202ENST00000414306 SMOXQ9NWM0 555 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 UCKL1Q9NWZ5 548 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 ZNHIT2Q9UHR6 403 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 PLEKHM1Q9Y4G2 1056 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 GPSM3Q9Y4H4 160 aa17.52■□□□□ 0.4
SBDS-202ENST00000414306 CABIN1Q9Y6J0 2220 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 OR2AG2A6NM03 316 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 C4orf47A7E2U8 309 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 E7ESA3 106 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 CD3EAPO15446 510 aaKnown RBP17.52■□□□□ 0.39
SBDS-202ENST00000414306 CDK14O94921 469 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 TNFP01375 233 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 PAMP19021 973 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 ACRV1P26436 265 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 PLA2G5P39877 138 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 ARCN1P48444 511 aaKnown RBP17.52■□□□□ 0.39
SBDS-202ENST00000414306 CCT8P50990 548 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 TMEM115Q12893 351 aaPredicted RBP17.52■□□□□ 0.39
SBDS-202ENST00000414306 GPR33Q49SQ1 333 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 LDLRAP1Q5SW96 308 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 UNC5AQ6ZN44 842 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 GSPT2Q8IYD1 628 aaKnown RBP17.52■□□□□ 0.39
SBDS-202ENST00000414306 RASGEF1AQ8N9B8 481 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.52■□□□□ 0.39
SBDS-202ENST00000414306 DTX3LQ8TDB6 740 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 LMX1AQ8TE12 382 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 C9orf72Q96LT7 481 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 LRRC61Q9BV99 259 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 TMEM168Q9H0V1 697 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 PLAC1Q9HBJ0 212 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 TM7SF3Q9NS93 570 aa17.52■□□□□ 0.39
SBDS-202ENST00000414306 PIKFYVEQ9Y2I7 2098 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 H3BM21 787 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 TNFRSF10CO14798 259 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 FFAR2O15552 330 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 DNAJC6O75061 913 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 CTSEP14091 401 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 EPHA8P29322 1005 aaPredicted RBP17.51■□□□□ 0.39
SBDS-202ENST00000414306 ECHS1P30084 290 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 B4GALNT1Q00973 533 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 GTF2H3Q13889 308 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 GALNT13Q8IUC8 556 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 TRAPPC5Q8IUR0 188 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 IFT20Q8IY31 132 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 OXR1Q8N573 874 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 ZNF548Q8NEK5 533 aaPredicted RBP17.51■□□□□ 0.39
SBDS-202ENST00000414306 CCL4L1Q8NHW4 92 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 PYROXD1Q8WU10 500 aa17.51■□□□□ 0.39
SBDS-202ENST00000414306 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms