RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GPR89AB7ZAQ6 455 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 GAPDHSO14556 408 aaPredicted RBP14.63□□□□□ -0.07
LIMS4-201ENST00000413601 B4GAT1O43505 415 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 VEGFDO43915 354 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 SNX2O60749 519 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 PPFIA2O75334 1257 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 CDK14O94921 469 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 GPR89BP0CG08 455 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 CA5AP35218 305 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 LSSP48449 732 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 TMEM115Q12893 351 aaPredicted RBP14.63□□□□□ -0.07
LIMS4-201ENST00000413601 OASLQ15646 514 aaKnown RBP14.63□□□□□ -0.07
LIMS4-201ENST00000413601 PLA2G4EQ3MJ16 856 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF438Q7Z4V0 828 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 TRIM58Q8NG06 486 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 OR4K2Q8NGD2 314 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 BRSK1Q8TDC3 778 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 GRAMD1AQ96CP6 724 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 TLR10Q9BXR5 811 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 POLR1BQ9H9Y6 1135 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 ARNT2Q9HBZ2 717 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 KLC4Q9NSK0 619 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 SLC23A2Q9UGH3 650 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF148Q9UQR1 794 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 URB1O60287 2271 aaKnown RBP14.63□□□□□ -0.07
LIMS4-201ENST00000413601 ACACAQ13085 2346 aa14.63□□□□□ -0.07
LIMS4-201ENST00000413601 PMS2P1A4D2B8 440 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 KMOO15229 486 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 TLX3O43711 291 aaPredicted RBP14.62□□□□□ -0.07
LIMS4-201ENST00000413601 CRTAMO95727 393 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 TPH1P17752 444 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 STIP1P31948 543 aaKnown RBP14.62□□□□□ -0.07
LIMS4-201ENST00000413601 ITGA9Q13797 1035 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 INSCQ1MX18 579 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 P3H1Q32P28 736 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 AMZ1Q400G9 498 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 FOXR1Q6PIV2 292 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 TMPRSS9Q7Z410 1059 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 LRRTM4Q86VH4 590 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF547Q8IVP9 402 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 DTX3LQ8TDB6 740 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 SLC37A2Q8TED4 501 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 LRRC45Q96CN5 670 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 RTP4Q96DX8 246 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 DCBLD2Q96PD2 775 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 FRMD8P1Q9BZ68 369 aaPredicted RBP14.62□□□□□ -0.07
LIMS4-201ENST00000413601 OSGEPL1Q9H4B0 414 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 LRRC40Q9H9A6 602 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 RDH14Q9HBH5 336 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 EPB41L5Q9HCM4 733 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 FKBPLQ9UIM3 349 aa14.62□□□□□ -0.07
LIMS4-201ENST00000413601 APC2O95996 2303 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 BPTFQ12830 3046 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 A6NCN8 305 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 PRAMEF1O95521 474 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 IFNB1P01574 187 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF7P17097 686 aaPredicted RBP14.61□□□□□ -0.07
LIMS4-201ENST00000413601 ACTN2P35609 894 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 GPR3P46089 330 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 INHBCP55103 352 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 TMPRSS15P98073 1019 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 NR1D2Q14995 579 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 SIX1Q15475 284 aaPredicted RBP14.61□□□□□ -0.07
LIMS4-201ENST00000413601 IYDQ6PHW0 289 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 USP53Q70EK8 1073 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 PRUNE1Q86TP1 453 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF761Q86XN6 746 aaPredicted RBP14.61□□□□□ -0.07
LIMS4-201ENST00000413601 SFRP1Q8N474 314 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 OR13C4Q8NGS5 318 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF398Q8TD17 642 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 TTC25Q96NG3 672 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 TMEM74Q96NL1 305 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 PRDM8Q9NQV8 689 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 PIH1D1Q9NWS0 290 aaKnown RBP14.61□□□□□ -0.07
LIMS4-201ENST00000413601 FEZ2Q9UHY8 353 aaPredicted RBP14.61□□□□□ -0.07
LIMS4-201ENST00000413601 DNAJC16Q9Y2G8 782 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 PIKFYVEQ9Y2I7 2098 aa14.61□□□□□ -0.07
LIMS4-201ENST00000413601 CCDC187A0A096LP49 1063 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 AGRPO00253 132 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 CCL22O00626 93 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 PSMD3O43242 534 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 LDB2O43679 373 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 SRP72O76094 671 aaKnown RBP14.6□□□□□ -0.07
LIMS4-201ENST00000413601 AP2A1O95782 977 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 FGGP02679 453 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 F3P13726 295 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 ETS1P14921 441 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 CD1CP29017 333 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 CXCR5P32302 372 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 FASLGP48023 281 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 CLCNKAP51800 687 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 ZNF140P52738 457 aaPredicted RBP14.6□□□□□ -0.07
LIMS4-201ENST00000413601 PDE1BQ01064 536 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 GTF2H3Q13889 308 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 TBC1D25Q3MII6 688 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 MAP9Q49MG5 647 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 LDLRAP1Q5SW96 308 aa14.6□□□□□ -0.07
LIMS4-201ENST00000413601 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.6□□□□□ -0.07
LIMS4-201ENST00000413601 GPRC6AQ5T6X5 926 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms