RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SNX2O60749 519 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 LDLRP01130 860 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 DCKP27707 260 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 RANBP1P43487 201 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
LIMS2-208ENST00000410011 ADARB1P78563 741 aaKnown RBP16.55■□□□□ 0.24
LIMS2-208ENST00000410011 MYBPC3Q14896 1274 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 TSNQ15631 228 aaKnown RBP16.55■□□□□ 0.24
LIMS2-208ENST00000410011 SDHAF4Q5VUM1 108 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 NANOGP8Q6NSW7 305 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 C17orf99Q6UX52 265 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 SYVN1Q86TM6 617 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 CLVS1Q8IUQ0 354 aaPredicted RBP16.55■□□□□ 0.24
LIMS2-208ENST00000410011 HID1Q8IV36 788 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 TRPV1Q8NER1 839 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 DNAJB14Q8TBM8 379 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 TEX37Q96LM6 180 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 PSKH2Q96QS6 385 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 BDH2Q9BUT1 245 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 MUC3BQ9H195 1237 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 NANOGQ9H9S0 305 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 ZFYVE28Q9HCC9 887 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 IKZF3Q9UKT9 509 aa16.55■□□□□ 0.24
LIMS2-208ENST00000410011 ARNTLO00327 626 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 IFRD1O00458 451 aaPredicted RBP16.54■□□□□ 0.24
LIMS2-208ENST00000410011 EI24O14681 340 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 NDUFS3O75489 264 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 GJB3O75712 270 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 EOMESO95936 686 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 CES1P23141 567 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 GPR15P49685 360 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 CLCN4P51793 760 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 CRY1Q16526 586 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 RABL3Q5HYI8 236 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 LRRC43Q8N309 656 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 C12orf43Q96C57 262 aaKnown RBP16.54■□□□□ 0.24
LIMS2-208ENST00000410011 LRRC3Q9BY71 257 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 SEPT3Q9UH03 358 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 SYN3O14994 580 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 PFDN6O15212 129 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 TSPAN12O95859 305 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 TBX18O95935 607 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 FMO4P31512 558 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 CACNB2Q08289 660 aaPredicted RBP16.54■□□□□ 0.24
LIMS2-208ENST00000410011 LYSMD3Q7Z3D4 306 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 BPIFB1Q8TDL5 484 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 FBXO32Q969P5 355 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 VPS33AQ96AX1 596 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 ZNF382Q96SR6 550 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 HGH1Q9BTY7 390 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.54■□□□□ 0.24
LIMS2-208ENST00000410011 LIN28AQ9H9Z2 209 aaKnown RBP16.54■□□□□ 0.24
LIMS2-208ENST00000410011 CXorf21Q9HAI6 301 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 SPC25Q9HBM1 224 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 SUN2Q9UH99 717 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 FAM50BQ9Y247 325 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 TIMM22Q9Y584 194 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 PCDHB3Q9Y5E6 796 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 COMMD10Q9Y6G5 202 aa16.54■□□□□ 0.24
LIMS2-208ENST00000410011 UBA6A0AVT1 1052 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 CDC7O00311 574 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 TPST1O60507 370 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 TULP3O75386 442 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 PRSS23O95084 383 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 GRK4P32298 578 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 APLP1P51693 650 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 UFM1P61960 85 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 GRSF1Q12849 480 aaKnown RBP eCLIP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 PRKG2Q13237 762 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 C6orf136Q5SQH8 315 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 ZFAND4Q86XD8 727 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 RIMKLAQ8IXN7 391 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 FNDC8Q8TC99 324 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 PROKR1Q8TCW9 393 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 BIRC7Q96CA5 298 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 GPR21Q99679 349 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 TMEM9Q9P0T7 183 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 MAGEL2Q9UJ55 1249 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 ST14Q9Y5Y6 855 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 CHD5Q8TDI0 1954 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 SLC12A8A0AV02 714 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 C2orf81A6NN90 581 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 C9JVG2 144 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 GIPC1O14908 333 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 VPS26AO75436 327 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 C1RP00736 705 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 MTHFD1P11586 935 aaKnown RBP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 PKMP14618 531 aaKnown RBP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 TACR2P21452 398 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 VARSP26640 1264 aaKnown RBP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 HOXD9P28356 352 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-208ENST00000410011 HLCSP50747 726 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 RAB15P59190 212 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 ECT2LQ008S8 904 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 C10orf120Q5SQS8 335 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 CCNYL2Q5T2Q4 361 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 NADSYN1Q6IA69 706 aa16.53■□□□□ 0.24
LIMS2-208ENST00000410011 GLB1LQ6UWU2 654 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms