RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FBXL8Q96CD0 374 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 NXNL1Q96CM4 212 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 CDCA5Q96FF9 252 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 C5orf30Q96GV9 206 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 SLC41A2Q96JW4 573 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 KCNK16Q96T55 309 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 MMS19Q96T76 1030 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 FAM110AQ9BQ89 295 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 KATNB1Q9BVA0 655 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 DPH5Q9H2P9 285 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 PRMT7Q9NVM4 692 aaPredicted RBP4.9□□□□□ -1.63
LSM5-205ENST00000409952 DLL3Q9NYJ7 618 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ADAMTS5Q9UNA0 930 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 TDRKHQ9Y2W6 561 aaKnown RBP4.9□□□□□ -1.63
LSM5-205ENST00000409952 HS3ST3A1Q9Y663 406 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 CLIC4Q9Y696 253 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 TEX264Q9Y6I9 313 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 CLCA3PQ9Y6N3 262 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 ARHGEF40Q8TER5 1519 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 EMSYQ7Z589 1322 aa4.9□□□□□ -1.63
LSM5-205ENST00000409952 MST1RQ04912 1400 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 AKR1B15C9JRZ8 316 aaPredicted RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 MCF2LO15068 1137 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 SMAD9O15198 467 aaKnown RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 ST8SIA3O43173 380 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 PALMO75781 387 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 SNX4O95219 450 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 MOCS3O95396 460 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 SLC16A8O95907 504 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 CHRM2P08172 466 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ETFAP13804 333 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 SRD5A1P18405 259 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 GNAZP19086 355 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ADSSP30520 456 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 CHRNA5P30532 468 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 FASLGP48023 281 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 EEFSECP57772 596 aaKnown RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 CYP4F2P78329 520 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 SORDQ00796 357 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 HSPB3Q12988 150 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 NAE1Q13564 534 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 PTPRRQ15256 657 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 UGCGQ16739 394 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 CDO1Q16878 200 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 SOWAHAQ2M3V2 549 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 BEAN1Q3B7T3 259 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 PLAC9Q5JTB6 97 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 FBXO46Q6PJ61 603 aaPredicted RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 MFSD7Q6UXD7 560 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ISLR2Q6UXK2 745 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ZBTB49Q6ZSB9 765 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 INTS8Q75QN2 995 aaKnown RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 C4orf19Q8IY42 314 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 SLC35F3Q8IY50 421 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ZNF595Q8IYB9 648 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 LNX2Q8N448 690 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 FBXO39Q8N4B4 442 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ZBTB2Q8N680 514 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 WIPF2Q8TF74 440 aaPredicted RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 EGLN2Q96KS0 407 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 CTAGE1Q96RT6 745 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 TXN2Q99757 166 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 PPIL3Q9H2H8 161 aaKnown RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 AKIRIN1Q9H9L7 192 aaPredicted RBP4.89□□□□□ -1.63
LSM5-205ENST00000409952 DNAJC11Q9NVH1 559 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ARL8BQ9NVJ2 186 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 AATFQ9NY61 560 aaKnown RBP eCLIP4.89□□□□□ -1.63
LSM5-205ENST00000409952 TAS2R14Q9NYV8 317 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 LAMP5Q9UJQ1 280 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 FBXL5Q9UKA1 691 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 ZNF541Q9H0D2 1346 aa4.89□□□□□ -1.63
LSM5-205ENST00000409952 A0A0U1RQF3 1178 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 CPED1A4D0V7 1026 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 SDR42E2A6NKP2 422 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 TRIM77I1YAP6 450 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 YY2O15391 372 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 MSI1O43347 362 aaKnown RBP4.88□□□□□ -1.63
LSM5-205ENST00000409952 KLK8O60259 260 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 PRAMEF11O60813 436 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 MED24O75448 989 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 CREG1O75629 220 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 GH2P01242 217 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 OPN1MWP04001 364 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 ABHD2P08910 425 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 OPN1MW2P0DN77 364 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 OPN1MW3P0DN78 364 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 CCDC192P0DO97 292 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 NR2F6P10588 404 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 VCLP18206 1134 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 AHCYP23526 432 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 NR2F2P24468 414 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 TIA1P31483 386 aaKnown RBP eCLIP4.88□□□□□ -1.63
LSM5-205ENST00000409952 IDUAP35475 653 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 FRKP42685 505 aaPredicted RBP4.88□□□□□ -1.63
LSM5-205ENST00000409952 PSMC4P43686 418 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 HNMTP50135 292 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 CLCNKBP51801 687 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 ZNF75DP51815 510 aa4.88□□□□□ -1.63
LSM5-205ENST00000409952 GFPT1Q06210 699 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms