RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PRELID2Q8N945 189 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 NUS1Q96E22 293 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 SH3GL2Q99962 352 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
TTC28-201ENST00000397906 ZBTB22O15209 634 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 KHDRBS3O75525 346 aaKnown RBP11.28□□□□□ -0.6
TTC28-201ENST00000397906 BCL10O95999 233 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 ZBTB6Q15916 424 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 TMEM192Q8IY95 271 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 GPER1Q99527 375 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 APLP1P51693 650 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 DUPD1Q68J44 220 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 ZNF730Q6ZMV8 503 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 DHX33Q9H6R0 707 aaKnown RBP11.28□□□□□ -0.6
TTC28-201ENST00000397906 LRRC19Q9H756 370 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 RAP2CQ9Y3L5 183 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 SESN1Q9Y6P5 492 aa11.28□□□□□ -0.6
TTC28-201ENST00000397906 UGT1A5P35504 534 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 LBX1P52954 281 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 MAPK12P53778 367 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 MON1BQ7L1V2 547 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 CCSER2Q9H7U1 834 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 GKN1Q9NS71 199 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 MYRFQ9Y2G1 1151 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 SUV39H1O43463 412 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 AVPR1BP47901 424 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 PNPOQ9NVS9 261 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 A8MUA0 341 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 GNB5O14775 395 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 LRIG2O94898 1065 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 NDST3O95803 873 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.6
TTC28-201ENST00000397906 ZNF540Q8NDQ6 660 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 NPAS2Q99743 824 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 EHD3Q9NZN3 535 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 DAPK2Q9UIK4 370 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 PCDHB1Q9Y5F3 818 aa11.27□□□□□ -0.6
TTC28-201ENST00000397906 PRKCHP24723 683 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 CORO7P57737 925 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 BMT2Q1RMZ1 405 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 CLVS1Q8IUQ0 354 aaPredicted RBP11.27□□□□□ -0.61
TTC28-201ENST00000397906 ART4Q93070 314 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 ARHGAP9Q9BRR9 750 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 MCCC2Q9HCC0 563 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 HMGXB4Q9UGU5 601 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 A0A1W2PPM1 405 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 BMP6P22004 513 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 RCVRNP35243 200 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 OC90Q02509 493 aaPredicted RBP11.27□□□□□ -0.61
TTC28-201ENST00000397906 GTF2H2Q13888 395 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 GTF2H2CQ6P1K8 395 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 DPYSL5Q9BPU6 564 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 TIPRLO75663 272 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 CAMK1Q14012 370 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 TIGD2Q4W5G0 525 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 DCLK1O15075 740 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 TXNDC8Q6A555 127 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 AHI1Q8N157 1196 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 NXNL1Q96CM4 212 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 LRTM1Q9HBL6 345 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 ZNF304Q9HCX3 659 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 LIN7AO14910 233 aaPredicted RBP11.27□□□□□ -0.61
TTC28-201ENST00000397906 ADRM1Q16186 407 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 RTL4Q6ZR62 310 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 PEX5LQ8IYB4 626 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 FCRL4Q96PJ5 515 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 CLEC4AQ9UMR7 237 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 PLGP00747 810 aaPredicted RBP11.27□□□□□ -0.61
TTC28-201ENST00000397906 BLKP51451 505 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
TTC28-201ENST00000397906 BST1Q10588 318 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 KRR1Q13601 381 aaKnown RBP11.27□□□□□ -0.61
TTC28-201ENST00000397906 CUZD1Q86UP6 607 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 STYXQ8WUJ0 223 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
TTC28-201ENST00000397906 SLC22A3O75751 556 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 CLDN9O95484 217 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ANXA4P09525 319 aaPredicted RBP11.26□□□□□ -0.61
TTC28-201ENST00000397906 SLC8B1Q6J4K2 584 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 IRF2BP2Q7Z5L9 587 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 LNX2Q8N448 690 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 PMM1Q92871 262 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 TRAF6Q9Y4K3 522 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 PCDHGB3Q9Y5G1 929 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ATRNO75882 1429 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 C2orf71A6NGG8 1288 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 WWP2O00308 870 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 C4BPBP20851 252 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ECT2LQ008S8 904 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 ZFP1Q6P2D0 407 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 FKBPLQ9UIM3 349 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 NMBRP28336 390 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 AKIRIN2Q53H80 203 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 GK5Q6ZS86 529 aa11.26□□□□□ -0.61
TTC28-201ENST00000397906 SHDQ96IW2 340 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms