RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 AARSD1Q9BTE6 412 aaKnown RBP13.57□□□□□ -0.24
VAPB-202ENST00000395802 USP36Q9P275 1121 aaKnown RBP13.57□□□□□ -0.24
VAPB-202ENST00000395802 SCN8AQ9UQD0 1980 aa13.57□□□□□ -0.24
VAPB-202ENST00000395802 A0A096LPK6 155 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 RNGTTO60942 597 aaKnown RBP13.56□□□□□ -0.24
VAPB-202ENST00000395802 GLRA3O75311 464 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 AP2A2O94973 939 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
VAPB-202ENST00000395802 OR56A5P0C7T3 313 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 MSH3P20585 1137 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 FMO4P31512 558 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 LSP1P33241 339 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 CRHR1P34998 444 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 NUDT1P36639 197 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 CDKN1CP49918 316 aaPredicted RBP13.56□□□□□ -0.24
VAPB-202ENST00000395802 CCR3P51677 355 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 MPP2Q14168 576 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 ZKSCAN8Q15776 578 aaPredicted RBP13.56□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D1Q86TI0 1168 aaPredicted RBP13.56□□□□□ -0.24
VAPB-202ENST00000395802 TRIM69Q86WT6 500 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 DDHD1Q8NEL9 900 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 EDAQ92838 391 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 C1QTNF2Q9BXJ5 285 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 SLC17A9Q9BYT1 436 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 SLC6A17Q9H1V8 727 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 GPAMQ9HCL2 828 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.56□□□□□ -0.24
VAPB-202ENST00000395802 GRID1Q9ULK0 1009 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 BPTFQ12830 3046 aa13.56□□□□□ -0.24
VAPB-202ENST00000395802 A0A1W2PQU0 124 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 GOLGA8RI6L899 631 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 ATP1B2P14415 290 aaPredicted RBP13.55□□□□□ -0.24
VAPB-202ENST00000395802 CHRM3P20309 590 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 CCNFP41002 786 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
VAPB-202ENST00000395802 TSNAXIP1Q2TAA8 658 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 ZNF789Q5FWF6 425 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 GPRC6AQ5T6X5 926 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 RFLNAQ6ZTI6 216 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 SLC41A1Q8IVJ1 513 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 CENPTQ96BT3 561 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 BIRC8Q96P09 236 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 NDNQ99608 321 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 SLC13A1Q9BZW2 595 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 P2RY12Q9H244 342 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 VPS11Q9H270 941 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 PCMTD2Q9NV79 361 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 COQ6Q9Y2Z9 468 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 IGLV3-16A0A075B6K0 115 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 KPNA5O15131 536 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 OR1I1O60431 355 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 MAGEC1O60732 1142 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 C2P06681 752 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 PRSS56P0CW18 603 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 GM2AP17900 193 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 FDXRP22570 491 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 CXCL12P48061 93 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 TAS2R39P59534 338 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 GTF2H3Q13889 308 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 PDE1CQ14123 709 aaPredicted RBP13.55□□□□□ -0.24
VAPB-202ENST00000395802 GAS6Q14393 721 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 FAM83EQ2M2I3 478 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 TMEM259Q4ZIN3 620 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 PNCKQ6P2M8 343 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 KLC3Q6P597 504 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 ADAMTSL4Q6UY14 1074 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 SH2D5Q6ZV89 423 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 FAM124AQ86V42 546 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 DENND6BQ8NEG7 585 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 ZNF514Q96K75 400 aaPredicted RBP13.55□□□□□ -0.24
VAPB-202ENST00000395802 INTS9Q9NV88 658 aaKnown RBP13.55□□□□□ -0.24
VAPB-202ENST00000395802 EBF1Q9UH73 591 aa13.55□□□□□ -0.24
VAPB-202ENST00000395802 GPR89AB7ZAQ6 455 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 DCXO43602 365 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 TYROBPO43914 113 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 SEMA4FO95754 770 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 PAK4O96013 591 aaPredicted RBP13.54□□□□□ -0.24
VAPB-202ENST00000395802 APOA4P06727 396 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 GPR89BP0CG08 455 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 ABCG1P45844 678 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 TTLL9Q3SXZ7 439 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 CCDC153Q494R4 210 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 RBM20Q5T481 1227 aaKnown RBP13.54□□□□□ -0.24
VAPB-202ENST00000395802 AGAP9Q5VTM2 703 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 SEL1L3Q68CR1 1132 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 KYAT3Q6YP21 454 aaKnown RBP13.54□□□□□ -0.24
VAPB-202ENST00000395802 CMC1Q7Z7K0 106 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 HIC2Q96JB3 615 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 LENG8Q96PV6 779 aaPredicted RBP13.54□□□□□ -0.24
VAPB-202ENST00000395802 KLF6Q99612 283 aaPredicted RBP13.54□□□□□ -0.24
VAPB-202ENST00000395802 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
VAPB-202ENST00000395802 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 CAB39LQ9H9S4 337 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 KLHL42Q9P2K6 505 aa13.54□□□□□ -0.24
VAPB-202ENST00000395802 TRMT6Q9UJA5 497 aaKnown RBP13.54□□□□□ -0.24
VAPB-202ENST00000395802 CCDC189A1A4V9 331 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms