RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 C21orf140B9A014 251 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 RASSF9O75901 435 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 CLDN1O95832 211 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 CCNYL3P0C7X3 344 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 ZNF8P17098 575 aaPredicted RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 AMD1P17707 334 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 XRCC1P18887 633 aaPredicted RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 SPINT3P49223 89 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 EPHB1P54762 984 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 DSC2Q02487 901 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 IL10RAQ13651 578 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 INPP5JQ15735 1006 aaPredicted RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 UGT8Q16880 541 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 EIF2S3LQ2VIR3 472 aaKnown RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 MAMDC2Q7Z304 686 aaPredicted RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 PHYKPLQ8IUZ5 450 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 AOPEPQ8N6M6 819 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 ENOX1Q8TC92 643 aaKnown RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 NSMCE1Q8WV22 266 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 KLHL6Q8WZ60 621 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 PCMTD1Q96MG8 357 aaPredicted RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 SLC25A23Q9BV35 468 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 CARD9Q9H257 536 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 OSGEPL1Q9H4B0 414 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 KLC4Q9NSK0 619 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 LUZP4Q9P127 313 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 SLC23A2Q9UGH3 650 aa15.59■□□□□ 0.09
SNCA-205ENST00000394991 PCDHGA9Q9Y5G4 932 aaKnown RBP15.59■□□□□ 0.09
SNCA-205ENST00000394991 DDAH2O95865 285 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 VIPP01282 170 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 ARL4AP40617 200 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 CAPZBP47756 277 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 ITKQ08881 620 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 PLA2G4EQ3MJ16 856 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 CACHD1Q5VU97 1274 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 PAPD7Q5XG87 772 aaKnown RBP15.58■□□□□ 0.08
SNCA-205ENST00000394991 TXNRD3NBQ6F5E7 133 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 ALG1LQ6GMV1 187 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 FAM199XQ6PEV8 388 aaPredicted RBP15.58■□□□□ 0.08
SNCA-205ENST00000394991 CLEC17AQ6ZS10 378 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 FAM92BQ6ZTR7 304 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 PPP1R3BQ86XI6 285 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 RAVER1Q8IY67 606 aaKnown RBP15.58■□□□□ 0.08
SNCA-205ENST00000394991 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNCA-205ENST00000394991 Q8NA96 180 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 LPCAT1Q8NF37 534 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 LYSMD1Q96S90 227 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 FAM83DQ9H4H8 585 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 LMBRD1Q9NUN5 540 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 DTLQ9NZJ0 730 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 DNPEPQ9ULA0 475 aa15.58■□□□□ 0.08
SNCA-205ENST00000394991 PCSK5Q92824 1860 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 ARGFXA6NJG6 315 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 LGALS16A8MUM7 142 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 MT-ND3P03897 115 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 TPM2P07951 284 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 ATP1A3P13637 1013 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 BRAFP15056 766 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 NELFEP18615 380 aaKnown RBP15.57■□□□□ 0.08
SNCA-205ENST00000394991 CCL11P51671 97 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 PPP1CAP62136 330 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 PWWP2BQ6NUJ5 590 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 CRTC3Q6UUV7 619 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 IRF2BP2Q7Z5L9 587 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 TRIM48Q8IWZ4 208 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 ARRDC2Q8TBH0 407 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 THAP4Q8WY91 577 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 HSPH1Q92598 858 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 TCTN2Q96GX1 697 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 POLR1EQ9GZS1 481 aaKnown RBP15.57■□□□□ 0.08
SNCA-205ENST00000394991 NUP62CLQ9H1M0 184 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 OR2AG1Q9H205 316 aa15.57■□□□□ 0.08
SNCA-205ENST00000394991 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.57■□□□□ 0.08
SNCA-205ENST00000394991 DIDO1Q9BTC0 2240 aaKnown RBP15.56■□□□□ 0.08
SNCA-205ENST00000394991 C1orf232A0A0U1RR37 186 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 WIPF3A6NGB9 483 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 GOLGA6L22H0YM25 854 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 FERP16591 822 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 PTPN4P29074 926 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 PCK1P35558 622 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 NIPAL4Q0D2K0 466 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 GPR18Q14330 331 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 SEPT7Q16181 437 aaKnown RBP15.56■□□□□ 0.08
SNCA-205ENST00000394991 CT47A1Q5JQC4 288 aaPredicted RBP15.56■□□□□ 0.08
SNCA-205ENST00000394991 ADGRG6Q86SQ4 1221 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 MAML1Q92585 1016 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 ING2Q9H160 280 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 PCDH18Q9HCL0 1135 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 ACSS2Q9NR19 701 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 FANCLQ9NW38 375 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 ERRFI1Q9UJM3 462 aaPredicted RBP15.56■□□□□ 0.08
SNCA-205ENST00000394991 PIKFYVEQ9Y2I7 2098 aa15.56■□□□□ 0.08
SNCA-205ENST00000394991 SEC16AO15027 2179 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 IGHV5-51A0A0C4DH38 117 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 OR52A4PA6NMU1 304 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 PDZK1P1A8MUH7 402 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 CHUKO15111 745 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 MFSD11O43934 449 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 LDLRP01130 860 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 RARAP10276 462 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms